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cn_combo_scaffold_1204_28

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(30007..30726)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036422C5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 239.0
  • Bit_score: 459
  • Evalue 2.40e-126
Transcriptional regulator {ECO:0000313|EMBL:ESZ09472.1}; TaxID=1287117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 239.0
  • Bit_score: 456
  • Evalue 1.70e-125
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 233.0
  • Bit_score: 445
  • Evalue 1.30e-122

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Taxonomy

Mesorhizobium sp. L2C085B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAGGGAGCCGCTGGAAATGGCAACGATCGCGCTTGTCGACGACGACCGCAACATTTTGACATCGGTTTCGATTGCGCTCGAGTCCGAAGGCTATCGTGTCGAGACTTACACCGACGGCGCTTCCGCGCTCGAAGGACTTACCGCCCGCCCACCGAACCTGGCGATCCTCGACATCAAGATGCCGCGCATGGACGGCATGGAACTTCTGCGCCGACTGCGCCAGAAGACCGATCTGCCGGTGATCTTCCTGACCTCCAAGGACGACGAGATCGATGAGCTGTTTGGGCTCAAGATGGGCGCCGACGATTTCATCCGCAAACCCTTCTCGCAGCGCCTGCTGGTCGAGCGCGTCCGCGCCGTGCTGCGCCGTGCCAGCGCCCGCGAGGCGGCAGCCAAGGCGCCGACGCAAGCGGCGCGCTCGCTCGAGCGCGGCCAGTTGGTCATGGACCAGGAGCGCCATACCTGCACCTGGAAGGGCGAACCGGTCGTGCTCACCGTCACCGAATTCCTCATCCTGCATTCGCTGGCGCAGCGCCCCGGCGTGGTCAAGAGCCGCGACGCTCTGATGGATTCGGCCTATGATGAGCAGGTCTATGTCGACGACCGCACCATCGACAGCCACATCAAGCGCCTGCGCAAGAAGTTCAAGGCCGTCGATGACGACTTCGAGATGATCGAGACCCTCTACGGCGTCGGCTACAGGTTCCGCGAGGCGTGA
PROTEIN sequence
Length: 240
MREPLEMATIALVDDDRNILTSVSIALESEGYRVETYTDGASALEGLTARPPNLAILDIKMPRMDGMELLRRLRQKTDLPVIFLTSKDDEIDELFGLKMGADDFIRKPFSQRLLVERVRAVLRRASAREAAAKAPTQAARSLERGQLVMDQERHTCTWKGEPVVLTVTEFLILHSLAQRPGVVKSRDALMDSAYDEQVYVDDRTIDSHIKRLRKKFKAVDDDFEMIETLYGVGYRFREA*