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cn_combo_scaffold_1246_9

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9858..10547)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003636B30 similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 234.0
  • Bit_score: 319
  • Evalue 3.70e-84
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 230.0
  • Bit_score: 288
  • Evalue 2.00e-75
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativoran similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 230.0
  • Bit_score: 288
  • Evalue 9.80e-75

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Taxonomy

Chelativorans sp. BNC1 → Chelativorans → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGCGACCACTGGCATTGCGGCACCCGATAGATCACGAAGCGGCCCGCGACGACGAACTGGTGGCCCTCGCCCGCCAGGCCGATGAGGCGGCAATCCGCGCGCTGATCAAGCGCAACAACCAGCGTCTCTTCCGCGTCGCCCGCGCCGTCGTGCGCGACGACGCCGAGGCCGAGGACGTGGTCCAGGAGACCTATGTCAGGGCCTTCACCAGGCTCGACGGCTTCAGGGGCGATGCGATGTTCTCGACATGGCTCACGCGCATCGCGCTCAACGAGGCCCTGGCACGTGTTAGGCGCAAGCGCCCTGTGTCGCTGCCGCTCGAAACCGCGACCGAACTGGAAGGAGGCCAGATAGTCATGTTTCCGACGCCGCCCACATCGGGAGCGGATGCCGAAGCCGGCCGCAGCCAGGTGCGTCAGATGCTCGAGGAGGCGATGGACGAGCTACCTCAGGCGTTCCGCATCGTCTTCGTCCTACGCGACGTCGAAGAACTCAGCGTGGAGGAGACCGCAGCACAGCTTTCGATCAAGCCGGAAACCGTCAAGACCCGGCTGTTCCGGGCGCGACGGCTGATGCGATCGGCCATCGAACGTCGGGTTTCGGCCGGTTTTGCGGAGCTGTTTCCGTTCATGGGCGTTCGCTGCGAACGCATGGCCGACCGCGTGATCGAGCGGCTGCGCCGAGCCTAG
PROTEIN sequence
Length: 230
MRPLALRHPIDHEAARDDELVALARQADEAAIRALIKRNNQRLFRVARAVVRDDAEAEDVVQETYVRAFTRLDGFRGDAMFSTWLTRIALNEALARVRRKRPVSLPLETATELEGGQIVMFPTPPTSGADAEAGRSQVRQMLEEAMDELPQAFRIVFVLRDVEELSVEETAAQLSIKPETVKTRLFRARRLMRSAIERRVSAGFAELFPFMGVRCERMADRVIERLRRA*