ggKbase home page

cn_combo_scaffold_1423_25

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(19926..20471)

Top 3 Functional Annotations

Value Algorithm Source
Conjugative transfer signal peptidase TraF n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PGG7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 262
  • Evalue 2.50e-67
Conjugative transfer signal peptidase TraF {ECO:0000313|EMBL:EKS37473.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia similarity UNIPROT
DB: UniProtKB
  • Identity: 69.6
  • Coverage: 181.0
  • Bit_score: 262
  • Evalue 3.50e-67
traF2; putative conjugal transfer protein TraF similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 181.0
  • Bit_score: 257
  • Evalue 3.90e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGAGCCGCCGGGGCATCATCCTCGCGACCACGGTGGCAGCGATGAGTGTCGTCTATGCGGCGATCAAACCAGTACCCGTCAGGTTGGTCTGGAATGCGTCTGCGAGCGTGCCAATTGGCCTCTATATTATCGACCCCGATGGTTCATTCGAGGTCGAGGACCTCGTCGCAGTCAACACACCAGAACCCCTCGCGACCCTGCTTGCCGAACGCGGCTATCTGCCCGAAGGCGTGCCGCTCCTGAAACGCGTTCGCGCACATGCGGGGCAAACCGTGTGCCGCTCGGACGTCGTCATAACGGTCGACGGCCGCGAGGCCGGCAGGGCACTTGAACGTGACCGTGCCGGGCGCCCATTGCCGGCCTGGGGTGGATGCCTGCGTATTCCCACCGGCAAGCTCTTCCTCATGAACGGTGAGGTCCGCGACAGCCTCGACGGTCGCTACTTCGGTCTCACATCCACAGATCGGATCATCGGCCGTGCCACTCCTCTTTGGACCGACGGGCGAGGCATTGGCTGCTTCGAATGGCGTGCGCAAACGCGGTGA
PROTEIN sequence
Length: 182
MSRRGIILATTVAAMSVVYAAIKPVPVRLVWNASASVPIGLYIIDPDGSFEVEDLVAVNTPEPLATLLAERGYLPEGVPLLKRVRAHAGQTVCRSDVVITVDGREAGRALERDRAGRPLPAWGGCLRIPTGKLFLMNGEVRDSLDGRYFGLTSTDRIIGRATPLWTDGRGIGCFEWRAQTR*