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cn_combo_scaffold_1423_33

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(25244..25903)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000368FA49 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 219.0
  • Bit_score: 347
  • Evalue 7.10e-93
ABC transporter {ECO:0000313|EMBL:ESY65550.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232 similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 219.0
  • Bit_score: 324
  • Evalue 9.10e-86
polar amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 215.0
  • Bit_score: 320
  • Evalue 3.40e-85

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Taxonomy

Mesorhizobium sp. LNHC232B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGAATTTGATCCCAGCTTTGCGCTTTCGACCGTGCCGACAATCCTGAGCGCCATCGGCATGACCCTGCTCGTTGCGGCCTGCAGCTGCCTCGGTGCTGCCGTGATCGGGTTCTGTCTCGAGATCACAAGGCGGAGCGGTGGCGTTCAGGGCCTCGCCGTCCGCTTCCTGATCGACTTCATCCGCGCCACACCGGTGCTGGTCTGGCTCTACTGCCTGTATTTCATTCTGCCTTACTACGGCATTCGCCTCGACGCGCTCACCGTAGGCATAGCCGGCCTCAGCATCTATTTCAGCGGTTATCTTGCCGAGGTCTTCAAGGCCGGAATCGATGCCATCGCCGAAGGCCAGCAGGAGGCAGCCAAAGCCCTCGGCCTTGGTCGGCTCGACCGGATCATCTTCGTCATCGCGCCGCAAATGCTGCGCAACATCGCAGCCCCCATGGGCAACTATTTCGTCTCGATTCTCAAGGCGACGCCCTATCTGGCTGTGCTGGCAGTGCCGGAGATGCTCGGCCAGGCTTTCGACATTGCCTCGGAAACCTATCGCTACGCCGAACCGCTCATGGTTGCCGGCATCATCTTTCTCTCGCTGGCGCTCGGAATCTCTCAAGGCATCAAATGGCTGGAGCGCCGCTTGTTGGCGCCGATGTCCCGATGA
PROTEIN sequence
Length: 220
MEFDPSFALSTVPTILSAIGMTLLVAACSCLGAAVIGFCLEITRRSGGVQGLAVRFLIDFIRATPVLVWLYCLYFILPYYGIRLDALTVGIAGLSIYFSGYLAEVFKAGIDAIAEGQQEAAKALGLGRLDRIIFVIAPQMLRNIAAPMGNYFVSILKATPYLAVLAVPEMLGQAFDIASETYRYAEPLMVAGIIFLSLALGISQGIKWLERRLLAPMSR*