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cn_combo_scaffold_1422_23

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(25524..26168)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031A19B3 similarity UNIREF
DB: UNIREF100
  • Identity: 33.2
  • Coverage: 217.0
  • Bit_score: 105
  • Evalue 7.90e-20
Porin {ECO:0000313|EMBL:CDX28946.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.7
  • Coverage: 225.0
  • Bit_score: 104
  • Evalue 2.50e-19
outer-membrane protein similarity KEGG
DB: KEGG
  • Identity: 31.3
  • Coverage: 233.0
  • Bit_score: 92
  • Evalue 1.50e-16

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGAAACGTCTTGCCGTTGCCTCGGCCGTCATGGCCGTGGCCGCCGGGTCTGCTTTTGCGCAGGAGGCAAAGCCTGCCGCCGTAGACTGGTCCGGCGCCTATGTCGGCGCCTTTGCAGGCGGAGCCAATGGCGATGCGACCTATACCAACGTCCCTGTCGGCATCCCCGATGTGGGCGCGATCGACGGAGGCCTCGCCGGTCTGAGAGCGGGCTATCGCTACCAGTACGGGCCGGCGGTCGTGGGCGTGTCCGTGGATGGGGCCCTCGCCAACGTCAACGGCATCGCGGGCAAGAGCAACCGCGCCCGGTTCGACGTAGACTGGCTGGCAACCGCCAATGCCCAGGTGGGCCTGGCTTTCGGCCGCGCACTGGTCTACGGCACCGCCGGCGGGGCGCTGGTCGGCATCGAGCACGACTACGACTCTTCCACGTCCTTCGACGTTTCTTACCCCCGCCGCACACACTCCGGCTATGTCATCGGCGGCGGCGCGGAGTATGCGTTTGCGGAAAAGGCCTCGATCAACTTCGAGCTTCGTCATTTCGTCCTTGAGAAGCAAACCTTTCCGCAGGTGCTCAATGTGCTGAGGCACGCTGTCGACGCCGATTTCACGACAGGTACCATCGGCCTGAACGTCAGGTTCTAA
PROTEIN sequence
Length: 215
MKRLAVASAVMAVAAGSAFAQEAKPAAVDWSGAYVGAFAGGANGDATYTNVPVGIPDVGAIDGGLAGLRAGYRYQYGPAVVGVSVDGALANVNGIAGKSNRARFDVDWLATANAQVGLAFGRALVYGTAGGALVGIEHDYDSSTSFDVSYPRRTHSGYVIGGGAEYAFAEKASINFELRHFVLEKQTFPQVLNVLRHAVDADFTTGTIGLNVRF*