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cn_combo_scaffold_1422_36

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(41645..42361)

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003123668 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 238.0
  • Bit_score: 410
  • Evalue 1.70e-111
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CCM79358.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 238.0
  • Bit_score: 384
  • Evalue 1.00e-103
high-affinity branched-chain amino acid ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 238.0
  • Bit_score: 378
  • Evalue 1.20e-102

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Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGACCGCAGCGCCGCTTGAAATCTCCGACCTGAGCGCCGGCTACGGCGCGACCCGGGTGCTGGAGAACGTTTCGTTCTCCGTCCCGGCCGGCTCGCGCCTCGCGGTGCTGGGCCGCAACGGCATGGGCAAGACGACGCTGCTGGCCACCATCGCCGGCCAGACCAAGCGCTACGGCGGCGCGATCCGCCTCGGCGGTACCGACATGAGCAGCATGGAAAGCTCGTCGCGCGCCCGCAGTGGCCTCGGCTACGTGCCGCAGGCGCGCTGCATCTTCCCCTCACTGACGGTCGAGGAGAACCTTTTCGTCGGGCTCAAGGATCGCGACCGCTCGGCCATCGAGGAGGCCTACCAGATGTTCCCGCGCCTCAAGGAGCGGCGCAGGAACCTCGGATCGCAGCTGTCCGGCGGCGAGCAGCAGATGCTGTCGACCGCCAGAACCATCCTCGGCAGGCCGACGGTGCTTCTGCTCGACGAACCGCTCGAGGGCCTGGCGCCCGTGATCTGCGAGGAGCTGATGGCGGCCTTCTCCAAGCTCGCTTCGGGTGGCGAGATGACCGTGCTGCTCGTCGAGCAGCGCATCCAGAGCGCGCTCGACTTCGCCGACCGCGCCATCATCCTCGAACGCGGCCGGATTGCATGGTCGGGCACGCCGGCCGAGCTGTCGGCGCACCCCGAGGTGGTGGAAAAGCTGCTCGGCGTCGGCGGCTTGCACTGA
PROTEIN sequence
Length: 239
MTAAPLEISDLSAGYGATRVLENVSFSVPAGSRLAVLGRNGMGKTTLLATIAGQTKRYGGAIRLGGTDMSSMESSSRARSGLGYVPQARCIFPSLTVEENLFVGLKDRDRSAIEEAYQMFPRLKERRRNLGSQLSGGEQQMLSTARTILGRPTVLLLDEPLEGLAPVICEELMAAFSKLASGGEMTVLLVEQRIQSALDFADRAIILERGRIAWSGTPAELSAHPEVVEKLLGVGGLH*