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cn_combo_scaffold_1515_28

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(21364..22257)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F1B47 similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 289.0
  • Bit_score: 545
  • Evalue 3.20e-152
Transcriptional regulator {ECO:0000313|EMBL:EJM41248.1}; TaxID=1144329 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 297.0
  • Bit_score: 438
  • Evalue 9.90e-120
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 297.0
  • Bit_score: 435
  • Evalue 9.90e-120

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Taxonomy

Pseudomonas sp. GM33 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCCGCGCGACAGCATCAACGACATCGTCGCTTTCCTCGCGGTGGCGCGGGAGCAGAGCTTCACCCGGGCGGCGGGCAAGCTGGGCGTCACGCCTTCGGCGCTCAGCCATACGGTGAGGGGGCTTGAGGAGCGGCTGGGTATCAGGCTCCTGTCGCGGACCACGCGGAACGTATCCCCGACCGAGGCGGGCGCGCGGCTGATGCAGGCGATCGGCCCGCATTTCGACGAGATCGAAGCCGAGATCGAGGCGCTCAGCGAACTGCGCGACCGGCCGGCGGGCACGGTGCGCATCACCTGCACCGACTATGTGATCGAGACGATCTTCCGGCCCAGGCTAAAGACCTTCCTGCGCCAGTACCCCGACATCAAGGTCGAGATGGTCATCGACTACGGCTTCACCAACATCGTCGAGCAGCGTTTCGATGCCGGCGTGCGGCTGGGCGAATCCGTCAGCAAGGACATGGTTGCGGTGCGCATCGGACCGGACTGGCGTTTCGCCGTCGTCGGCTCGCCCGACTATTTCGAGCGGCGCTCGCCGCCCGAAACCCCGCAGGACCTTACCAACCACAAATGCATCAACCTGCGCCTGACCACCGCGGGCGGCATCTATGCCTGGGAGTTCGAGAAGGACGGGCGCGAACTCAATGTGCGTGTCGACGGCCAGCTGACCTACAACAGCATCCTGCCGGTGCTGGGTGCTGCGGTCGATGGTTTCGGACTCGCCTATGTCGCCGAGGATCTCGCCCGCCCCTATATCGACGACGGCCGGCTGGTCGAGGTGTTGGCCGACTGGTGCCCAAAGCTCCAGGGCTATCACCTCTACTACCCCAACCGCCGCCAGGCCTCGCCCGCGTTTTCGCTTCTCGTGGAGGCGCTGCGCTACCGAGGCTAG
PROTEIN sequence
Length: 298
MPRDSINDIVAFLAVAREQSFTRAAGKLGVTPSALSHTVRGLEERLGIRLLSRTTRNVSPTEAGARLMQAIGPHFDEIEAEIEALSELRDRPAGTVRITCTDYVIETIFRPRLKTFLRQYPDIKVEMVIDYGFTNIVEQRFDAGVRLGESVSKDMVAVRIGPDWRFAVVGSPDYFERRSPPETPQDLTNHKCINLRLTTAGGIYAWEFEKDGRELNVRVDGQLTYNSILPVLGAAVDGFGLAYVAEDLARPYIDDGRLVEVLADWCPKLQGYHLYYPNRRQASPAFSLLVEALRYRG*