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cn_combo_scaffold_1519_39

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(37928..38689)

Top 3 Functional Annotations

Value Algorithm Source
sugar ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI000362711C similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 253.0
  • Bit_score: 477
  • Evalue 9.00e-132
ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 253.0
  • Bit_score: 429
  • Evalue 6.10e-118
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 253.0
  • Bit_score: 429
  • Evalue 3.00e-117

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Taxonomy

Leptothrix cholodnii → Leptothrix → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
ATGAATTTCCACGCGATCCGCGCGATCTACCTGTTCGAGATGGCACGCACCTGGCGGACGCTGCTGCAGAGCATCGTCTCGCCGGTCATCTCGACCTCGCTCTATTTCGTCGTCTTCGGCGCGGCCATCGGCTCGCGCATCAGCGAGATCAACGGCATCACCTACGGCGCCTTCATCGTGCCGGGCCTGATCATGCTGTCGCTGTTGACGCAGAGCATCTCGAACGCCTCATTCGGCATCTACTTCCCGAAATTCGTCGGCACCATCTACGAGCTGTTGTCGGCGCCGGTGTCCTATATCGAGATCGTCATCTCCTATGTCGGGGCGGCGGCGTCGAAATCGATCATCCTCGGCCTGATCATCCTGGCGACCGCCTCGCTGTTCGTGCCCCTCCAGATCCAGCACCCGGTCTGGATGCTGGTGTTCCTGGTGCTGACCGCGGTGACCTTCAGCCTGTTCGGCTTCATCATCGGCATCTGGGCCGGCAATTTCGAGCAACTGCAACTGGTGCCGCTGCTGATCGTGACGCCGCTTACCTTCCTGGGCGGTAGCTTCTATTCCATCGACATGCTGCCGCCGTTCTGGCGCACGGTGTCGCTGTTCAACCCGGTGGTCTATCTGGTCAGCGGCTTCCGCTGGAGCTTCTTCGGCATGTCGGACGTCAACATCGGCATCAGCCTTGGCATGACGCTGGTGTTCCTGGCCGCTTGCCTTGTCACGGTGTCGTGGATTTTCCGGACCGGCTGGCGGATCAAGGTCTGA
PROTEIN sequence
Length: 254
MNFHAIRAIYLFEMARTWRTLLQSIVSPVISTSLYFVVFGAAIGSRISEINGITYGAFIVPGLIMLSLLTQSISNASFGIYFPKFVGTIYELLSAPVSYIEIVISYVGAAASKSIILGLIILATASLFVPLQIQHPVWMLVFLVLTAVTFSLFGFIIGIWAGNFEQLQLVPLLIVTPLTFLGGSFYSIDMLPPFWRTVSLFNPVVYLVSGFRWSFFGMSDVNIGISLGMTLVFLAACLVTVSWIFRTGWRIKV*