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cn_combo_scaffold_1519_56

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 57112..57750

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI0003725DB2 similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 210.0
  • Bit_score: 396
  • Evalue 2.20e-107
DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway {ECO:0000313|EMBL:CDX13363.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 210.0
  • Bit_score: 388
  • Evalue 8.40e-105
tetracycline transcriptional regulator YcdC domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 212.0
  • Bit_score: 383
  • Evalue 5.50e-104

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGACGGTGGACGGCACGGCGGCGCGCGGCCGCACACGCATCCAGCAGGAGAAGCGCGAGGTCATCCTCGAGGCCGCCCTCGACGTGTTCTCGACCCACGGCTTCCGCGGCTCGACCATCGACCAGATCGCCGAGGCGGCGGGCATGTCCAAGCCCAACCTGCTTTATTATTTCCGGCGCAAGGAAGACATCCACGAAACCCTGATGCATCGGCTGCTCGACACCTGGCTGGCGCCCCTGAAGGAACTCGACAACATCGGCGACCCGCTGACCGAACTCCGGAGCTACATCCGGCGAAAGCTGGAAATGGCGCGCGACTATCCGCGCGAGAGCCGGCTGTTCGCGAACGAGATCCTTCAAGGGGCGCCGCGCATCATGCCAATGCTCGAAGGCGAGTTGAAGACGCTCGTCGACGAGAAGGTCGAGGTCATGAAGGGCTGGATGCGGGCCGGCAAGATCGCAAGGACCGATCCCTGGCACCTGATCTTCGCCATCTGGGCGACGACGCAGCACTATGCCGACTTCGACGTCCAGGTGCGCGCAGTGCTCGGCCCCGACCGTGGCGGCGAAGGCCGATTCGAGGACGCGGCGCGGTTCCTAGAACAGCTTTTCCTCGACGGAATTAGGCCCAAGTCCTGA
PROTEIN sequence
Length: 213
MTVDGTAARGRTRIQQEKREVILEAALDVFSTHGFRGSTIDQIAEAAGMSKPNLLYYFRRKEDIHETLMHRLLDTWLAPLKELDNIGDPLTELRSYIRRKLEMARDYPRESRLFANEILQGAPRIMPMLEGELKTLVDEKVEVMKGWMRAGKIARTDPWHLIFAIWATTQHYADFDVQVRAVLGPDRGGEGRFEDAARFLEQLFLDGIRPKS*