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cn_combo_scaffold_1665_7

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 9202..9798

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1287105 species="B similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 198.0
  • Bit_score: 349
  • Evalue 3.10e-93
UPI0003D00FB2 related cluster n=1 Tax=unknown RepID=UPI0003D00FB2 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 198.0
  • Bit_score: 349
  • Evalue 2.20e-93
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 198.0
  • Bit_score: 347
  • Evalue 2.40e-93

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Taxonomy

Mesorhizobium sp. L2C066B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGCCGCGACTTTTCACCGCCCTCGAAATTCCGCGTGATGCCGCACTTTCCCTCTCGCTGCTGCGGGGAGGTCTGCCCGGAGCGCGCTGGATCGATGTCGAGAACTACCATCTCACCCTGCGTTTCATCGGCGATGTCGAAGGCCATGTGGCCGACGAGATCGTGGAGGCGCTCGACCGCGTCGACAAGCCCGGCTTCCAGCTGACGCTGTCGGGGGTCGGTGCATTCGGACAGAAGAAGCCGCACGCGGTTTGGGCGGGTGTCATCCCGTCGCCCGAACTCAACGCCCTGCAGGCGGAGATCGACCGGATCTGCAAGCGGCTGGGCGTGCCTTCCGATCCGCGCAAGTTCACGCCGCACGTCACTTTGGCGCGGCTCAGGAACACCAGTCCACTCGACGTGGCGTACTATCTCTCGGCGCGCGGGAACTTCGCCACCGTGCCCTTCCGGGTCGGGCGCTTCGTGCTGATGTCTTCGCGCGACTCAGTCGGCGGGGGACCCTATGTCGTCGAGGAGGCGTGGCCGCTCAACGGCGTCGCCTCGCGGCCGGCGAGCCGGTCGGCCAGTGCCTCCGAAGCCTCGCGGATCATGCGGTAG
PROTEIN sequence
Length: 199
MPRLFTALEIPRDAALSLSLLRGGLPGARWIDVENYHLTLRFIGDVEGHVADEIVEALDRVDKPGFQLTLSGVGAFGQKKPHAVWAGVIPSPELNALQAEIDRICKRLGVPSDPRKFTPHVTLARLRNTSPLDVAYYLSARGNFATVPFRVGRFVLMSSRDSVGGGPYVVEEAWPLNGVASRPASRSASASEASRIMR*