ggKbase home page

cn_combo_scaffold_1665_30

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 29098..30045

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000369D647 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 315.0
  • Bit_score: 584
  • Evalue 8.50e-164
Uncharacterized protein {ECO:0000313|EMBL:KKN96366.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 316.0
  • Bit_score: 505
  • Evalue 5.40e-140
sugar ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 316.0
  • Bit_score: 470
  • Evalue 3.90e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 948
ATGTTTACCAGACGCACCGTGCTCGGCGCCCTCGGCGCCGCAGCGATCCTGGGCTACGGCTCGACCATCGCGATGGCCCAGGACAAGATGTACATCCCGCTCATCTCCAAGGGCTTCCAGCACCAGTTCTGGCAGGCCGTGAAGGCAGGCGCCGACAAGGCCGCTGCCGATCTCGGGGTCGAGGTCACCTTCGAGGGGCCGGACTCGGAATCGCAGGTCGATCGCCAGATCGACATGCTGGCCGCGGCACTCGCCAAGAAGCCGGCAGCGCTCGGCTTTGCGGCCCTCGACAGCCAGGCGGCGATCCCGCTCCTGCAGCAGGCCAAGGATGCCAAGATCCCGGTCGTCGCCTTCGACTCGGGCGTCGACAGCGACATCCCCGTCGCCACCGCTTCGACCAACAACATCGCGGCGGCCGCACTCGCGGCCGACAAGATGGCCGAGCTTATCGGCGACGAGGGCAAGGTGGCCGTGCTGGTGCATGACCAGACCAGCCGCACCGGCATCGATCGGCGCGACGGTTTCGTCAACCGCATGAAGGAAGCCCACCCCAAGGTCGAGATCGTCTCGATCGAATATGGCGGCGGCGACCACCTCAAGTCGACCGAGATCACCAAGGCCGTCCTGCAGGCCAATCCGGACCTCAAGGGCATGTTCGGCGGCAACGAGGGCTCGGCCATCGGCGTGGTCAACGGCGCCAAGGAACTGGGCCGCAAGCTGGTGATCATCGGCTATGACTCGGGCGCCCAGCAGAAGCAGGCGATCCGCGACGGCGAGATGGCCGGAGCGATCACCCAGAACCCGGTCGGCATCGGCTACAAGACGGTCGAGGCCGCTGTGAAGGCGGCCAAGGGCGAGGCGGTCGAGAAGAACATCGACACCGGCTTCTACTACTACGACAAGTCGAACATCGATAATCCGGAGATCGCAGCCGTCCTGTACGACTGA
PROTEIN sequence
Length: 316
MFTRRTVLGALGAAAILGYGSTIAMAQDKMYIPLISKGFQHQFWQAVKAGADKAAADLGVEVTFEGPDSESQVDRQIDMLAAALAKKPAALGFAALDSQAAIPLLQQAKDAKIPVVAFDSGVDSDIPVATASTNNIAAAALAADKMAELIGDEGKVAVLVHDQTSRTGIDRRDGFVNRMKEAHPKVEIVSIEYGGGDHLKSTEITKAVLQANPDLKGMFGGNEGSAIGVVNGAKELGRKLVIIGYDSGAQQKQAIRDGEMAGAITQNPVGIGYKTVEAAVKAAKGEAVEKNIDTGFYYYDKSNIDNPEIAAVLYD*