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cn_combo_scaffold_1745_9

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 7889..8902

Top 3 Functional Annotations

Value Algorithm Source
channel protein TolC n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FF09C similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 337.0
  • Bit_score: 587
  • Evalue 6.30e-165
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EHH10968.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium. similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 337.0
  • Bit_score: 552
  • Evalue 3.10e-154
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 337.0
  • Bit_score: 550
  • Evalue 3.10e-154

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Taxonomy

Mesorhizobium amorphae → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
GTGCAGGACTATCTCGAATACGTGCTGCAGGTTCAGATCGTCGCCGACGCCAAGCAGAACCTCGGCTTCCACCAGTCGATCCTCGGCGATATCCGCGAGGGCGTGCAGGGCGGCGCGCTGACCGACGCCGACCGCCAGCAGGCCGAGGAACGCCTCTTCGCCGCAAAGGCCCGCCTTCAGGAAGCCAACGAGGAGCTGGAGGCCGCAAAGATCCGCTTCTTCAAGACCGTCGGCAAGCCGCTGGTGAACGCGTCGAAGCCCGGGTCCGTGGCAAAGGCCCTGCCCCGCTCGCTGGACGACGCTCTGGGGATCGCGCGTCGCAACAATCCGCGCATCCACATGGCCAACAGCGACATCGACGCTGCCGCAGCCCTGGTCGACGCCGCACGCGCCAAGTACGGCCCTGAAGTGGTGGCCGAAGGCCGCGCCCGCGCCGGCACCGATATCGATGGCGACGAGGACGACACCAACGACCTGCAGGCCCGGCTGGTGCTGCGCTGGAACCTCTACCGCGGCGGCATCGACAAGGCCAACGAGCAGGAGCAGATCCGGCGCGTGAGCGAGCAGCGCCTTGCGCTGAACCAGGTTCAGCGCGAGGTCGACGAGGCCGTGCGCATCTCCTGGGACCGCCGCTTCCGCCAGGCTGAAATCGCCGGTACCCTGCGCCAGCAGGCGGTGGCCAGTGCCCGGCTGGTGACCTCGTATCGCGAGCAGTTCAAGGTCGGACAGCGTTCGCTGCTCGACGTGCTCGACGCGCAGAACACGCGCTTCAACACCGACAACCTTGCGAACACTTCGGCCTTCGCTTCGCTGTTCGCCGAGTACCGCCTTCTCGCGGCGACCGGACAGCTGCTGCGGACGATGAACATCACGCCGGCAAAGCAGTCGACCGCTTATGCCCGCGGAGAGTTCAACGTGCCCGAGACGGCCGATACGGAAACCTATGCCAGGACGCCCTCGGAACAGGTGAACAATCTGCCTTTCGATCTGCTGGCGCCTGTCAGAAAGAACTAG
PROTEIN sequence
Length: 338
VQDYLEYVLQVQIVADAKQNLGFHQSILGDIREGVQGGALTDADRQQAEERLFAAKARLQEANEELEAAKIRFFKTVGKPLVNASKPGSVAKALPRSLDDALGIARRNNPRIHMANSDIDAAAALVDAARAKYGPEVVAEGRARAGTDIDGDEDDTNDLQARLVLRWNLYRGGIDKANEQEQIRRVSEQRLALNQVQREVDEAVRISWDRRFRQAEIAGTLRQQAVASARLVTSYREQFKVGQRSLLDVLDAQNTRFNTDNLANTSAFASLFAEYRLLAATGQLLRTMNITPAKQSTAYARGEFNVPETADTETYARTPSEQVNNLPFDLLAPVRKN*