ggKbase home page

cn_combo_scaffold_1745_36

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(29701..30558)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000375C874 similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 229.0
  • Bit_score: 419
  • Evalue 3.30e-114
Helix-turn-helix type 11 domain-containing protein {ECO:0000313|EMBL:CDX24065.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 226.0
  • Bit_score: 376
  • Evalue 4.50e-101
Helix-turn-helix type 11 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 81.6
  • Coverage: 228.0
  • Bit_score: 368
  • Evalue 1.40e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
TTGTCGACCCACGAGGGTTTTGGGACCCAGGCGCATATCGTGCCCAGCGCCCTCGTGGTTCGACAGGCTCACCATGAGGGCTACTGCGGGGGGCTTTCGCCACTCCATGCCTTCCGACACTGCCATCTCCGGCCTATCTTCCCCACCAAAGCCGCCCTGAGAATCATGTCTCGCTCCGAACGCCTGCTCGACCTCATCCAGATCCTGCGCCGCCACCGCCGGCCGGTGAGCGGGTCGACCCTTGCCGGCGAGCTCGATGTGTCGATCCGCACGCTCTATCGCGACATCGCCACCTTGCAGGGGCAGGGCGCGCCGATCGAGGGTGAGCCGGGGCTGGGTTATGTGCTGAAGCCCGGCTTCATGCTGCCGCCGCTGATGTTCACCGACGAGGAGATCGAAGCGATCGTGCTCGGTTCGCGCTGGGTGGCGAAGCAGCCCGACACCAGGCTGTCGGCAGCGGCGGCCGACGCGCTTGCCAAGATCGCCGCGGTCCTGCCCGACGATTTGCGCGAGGAGCTCGACGCCAACGCCCTGCTGGTTGGCCCGAGCGCCGAGGCGACGCGTGAAAGCGCCGACCTCGGCATCATCCGCAAGGCGATCCGCGCCGAGCGCAAGCTGGAGTCGACCTATCAGGACGCTGCGGGCGCCGGCTCACGACGCATCGTCTGGCCCTTTGCGCTTGGCTTCTTCGACAAGGTTCGGGTGATGGTGGCGTGGTGCGAGATGCGTGAGGATTTCAGGCATTTTCGCGCCGATCGCATTTCGGAACTCGCCGCTACCGACACGCGCTATCCCCGCCGCCGCGCCGTCATGCTGAAGGAATGGCGGGCGACGCTCGACACAACAAGGAAGCGTTGA
PROTEIN sequence
Length: 286
LSTHEGFGTQAHIVPSALVVRQAHHEGYCGGLSPLHAFRHCHLRPIFPTKAALRIMSRSERLLDLIQILRRHRRPVSGSTLAGELDVSIRTLYRDIATLQGQGAPIEGEPGLGYVLKPGFMLPPLMFTDEEIEAIVLGSRWVAKQPDTRLSAAAADALAKIAAVLPDDLREELDANALLVGPSAEATRESADLGIIRKAIRAERKLESTYQDAAGAGSRRIVWPFALGFFDKVRVMVAWCEMREDFRHFRADRISELAATDTRYPRRRAVMLKEWRATLDTTRKR*