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cn_combo_scaffold_1815_16

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 12404..13666

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=653930 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 96.4
  • Coverage: 421.0
  • Bit_score: 790
  • Evalue 8.60e-226
transcription termination factor Rho n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D8F3AB similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 421.0
  • Bit_score: 797
  • Evalue 6.50e-228
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 95.2
  • Coverage: 421.0
  • Bit_score: 783
  • Evalue 3.60e-224

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCAGGAAATGAAACTCCAGGATTTCAAGAACAAGAAACCGACCGACCTGATTGCATTCGCCGAATCGCTCGAGGTCGAGAACGCCAGCGTGATGCGCAAGCAGGAGCTGATGTTCGCCATCCTGAAGAAGCTTGCTGCCCAGGATATCGAGATTATCGGCGACGGCGTGGTCGAGGTGCTGCAGGACGGCTTCGGCTTCCTGCGTTCGGCCAACGCGAACTACCTGCCGGGCCCGGACGACATCTACATCTCGCCGTCGCAGATCCGCCGCTTCTCGCTTAAGACAGGCGACACCGTCGAAGGCCCGATCCGCAGCCCGAAGGAAGGCGAACGCTATTTCGCGCTGCTCAAGGTCAATACGATCAATTTCGACGACCCCGAGAAGATCCGTCACAAGATCCACTTCGACAACTTGACGCCGCTCTATCCGAACGAGCGGCTCAAGATGGAGACGGAGACCCCGACCAAGGATCTTTCCGCTCGCGTCATTGACCTGGTGGCGCCGCTCGGCAAGGGCCAGCGCGGCCTGATCGTCGCGCCGCCGCGCACTGGTAAGACGGTGCTGCTGCAGAACATCGCCCATTCGATCACCGCCAATCATCCGGAATGCTACCTGATCGTGCTGCTGATCGACGAGCGGCCGGAGGAAGTGACCGACATGCAGCGCTCGGTGAAGGGCGAGGTCGTGTCCTCGACCTTCGACGAGCCGGCTGCGCGCCACGTCCAGGTCGCCGAAATGGTCATCGAGAAGGCCAAGCGCCTCGTCGAGCACGGCCGTGACGTCGTCATCCTGCTCGATTCGATCACCCGTCTCGGCCGCGCCTACAACACCGTCGTGCCGTCATCCGGCAAGGTGCTGACCGGCGGCGTCGACGCCAACGCCCTGCAGCGCCCGAAGCGCTTCTTCGGCGCGGCGCGCAACATCGAGGAAGGCGGTTCGCTGACGATCATCGCCACCGCGCTGATCGACACCGGCAGCCGCATGGACGAAGTGATCTTCGAAGAGTTCAAGGGTACCGGCAACTCCGAAATCGTGCTCGACCGCAAGGTTGCCGACAAGCGCATCTACCCGGCGATGGACATCCTGAAATCCGGTACGCGCAAGGAGGACCTGCTGGTCCAGCGCCAGGACCTGCAGAAGATCTTCGTCCTGCGCCGCATACTGGCGCCGATGGGCACGACGGATGCGATCGAGTTCCTCATCGACAAGCTGAAGCAGACCAAGACCAACGGCGACTTCTTCGATTCGATGAACACCTGA
PROTEIN sequence
Length: 421
MQEMKLQDFKNKKPTDLIAFAESLEVENASVMRKQELMFAILKKLAAQDIEIIGDGVVEVLQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVNTINFDDPEKIRHKIHFDNLTPLYPNERLKMETETPTKDLSARVIDLVAPLGKGQRGLIVAPPRTGKTVLLQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAARHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIYPAMDILKSGTRKEDLLVQRQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNGDFFDSMNT*