ggKbase home page

cn_combo_scaffold_1815_30

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(28395..29126)

Top 3 Functional Annotations

Value Algorithm Source
peptidase S41 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E241F similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 243.0
  • Bit_score: 461
  • Evalue 4.90e-127
Cytochrome c oxidase subunit FixO {ECO:0000313|EMBL:EYR80654.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12. similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 243.0
  • Bit_score: 435
  • Evalue 4.00e-119
Cytochrome c oxidase, cbb3-type, subunit II similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 243.0
  • Bit_score: 430
  • Evalue 2.60e-118

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGGCACTGCTCGACAAACACCAGATCCTCGAGAGAAACGCGACGCTCCTCCTGATCGGCTCGCTGATCGTCGTCAGCATCGGCGGCATCGTTCAGATCACGCCGCTCTTCTACCTCGAGAACACCATCGAAAAGGTGGAGGGGATGCGTCCCTACTCGCCGCTGGAGCTCGCCGGCCGCAACATCTACATCCGTGAAGGCTGCTACACCTGCCACAGCCAGATGATCCGCCCCTTCCGCGACGAGGTGGAGCGCTATGGCAACTACAGCCTGGCCGCGGAGTCGATGTACGACCATCCCTTCCAGTGGGGATCGAAGCGCACCGGCCCCGACCTCGCCCGCGTCGGCGACCGCTACTCCAACGAGTGGCATGTCCAGCATCTGATCGAGCCGCGCTCGGTCGTGCCGGAGTCGGTCATGCCAAGCTACTCGTTCCTCAAGGAAACTCCGCTCACGGTGAAGAACATCAGCTACGACCTGGTGGCCAACCGCCGCGTCGGCGTTCCCTACAGCGACGAGATGATCGCCAGTGCGGACGCCGACCTCAAGGCGCAAGCCGACCCGAACGCCGACACCAGCGGCCTGCTGGCACGCTACCCGAAGGCCAAGATCGGCGATTTCGACGGCAACCCGACGACCGTGACCGAAATGGACGCGCTCGTCGCCTATCTGCAGATGCTCGGCACCCTGGTCGACTTCTCGACCTACAAGCCCGAAGCCAACTTCCGCTAG
PROTEIN sequence
Length: 244
MALLDKHQILERNATLLLIGSLIVVSIGGIVQITPLFYLENTIEKVEGMRPYSPLELAGRNIYIREGCYTCHSQMIRPFRDEVERYGNYSLAAESMYDHPFQWGSKRTGPDLARVGDRYSNEWHVQHLIEPRSVVPESVMPSYSFLKETPLTVKNISYDLVANRRVGVPYSDEMIASADADLKAQADPNADTSGLLARYPKAKIGDFDGNPTTVTEMDALVAYLQMLGTLVDFSTYKPEANFR*