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cn_combo_scaffold_1911_7

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 7453..8391

Top 3 Functional Annotations

Value Algorithm Source
rhizopine-binding protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036ABED6 similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 312.0
  • Bit_score: 533
  • Evalue 1.30e-148
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EHS52570.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobia similarity UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 313.0
  • Bit_score: 475
  • Evalue 7.70e-131
Rhizopine ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 313.0
  • Bit_score: 466
  • Evalue 5.50e-129

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Taxonomy

Rhizobium sp. PDO1-076 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGAAGAAATATTTGCTCGGCGCCGCACTGACGGTGCTGATGGCGGGAACCGCGTTTGCCGGCGACATCGGCGTCAGCATGGCCAATTCGGACACGTTCCTGACTGTCCTTCGCAAGGGCATCGAGAAGTCCGCGGCCGACGCTAGCCAGCCCGTCGTCATTGAAATCGCCGACGACGACGTCAACAAGCAGCTCAGCCAGGTCCAGAACTTCATCGCCGCCAAGGTCGACGCGATCATCGTCAACCCGGTCGACACGTCTGCCACCGGGCCGATGACCAAGCTCGCAAACGACGCCGGCATTCCGATCGTCTACGTCAATCGCGAGCCGATCGACGTCGCGGCGCTCGGTGCCAAGGGTGCGTTCGTCGGCTCGAACGAGGTCGATTCCGGTACGCTGGAGACCAAGGAAGTCTGCCGCATCCTCAAGGAGGCCGGCAAGACCGAGGCGGGCATCCTGATCATGGTCGGCGACCTCGCCAACCAGGCCGCGGTGATGCGCACCAAGGACATCCACGATGTCAACGCCGGCAGCGAATGCGGCGTCAAGCTCAACGTCATCGACGAGCAGACCGCCGGCTGGGATCCGGTCAAGGCGCAGGACCTGATGACCAACTGGATCGCTGCCGGCCACAAGCCGGAAGCCGTCATCTCCAACAACGACAACATGGCCATCGGCGCCATCAACGCCATGAAGGCGGCCGGCTGGGACATGAAGGACGTGATCGTGGCCGGCGTCGACGCGACCCAGGAAGCGCTAGCCTACATGAAGGCCGGCGACCTCGACGTCACCGTGTTCCAGAACGCGGCCGCGCAGGGCAGCGGGGCGGTCGAGACGGCCATGAAGCTCGCCAAGGGCGAAGCGGTGACGTCGCCCGTGTGGGTTCCGTTCGAGCTCGTGACCCCGGCGAATATGGACCAGTACACGACCAAGAACTGA
PROTEIN sequence
Length: 313
MKKYLLGAALTVLMAGTAFAGDIGVSMANSDTFLTVLRKGIEKSAADASQPVVIEIADDDVNKQLSQVQNFIAAKVDAIIVNPVDTSATGPMTKLANDAGIPIVYVNREPIDVAALGAKGAFVGSNEVDSGTLETKEVCRILKEAGKTEAGILIMVGDLANQAAVMRTKDIHDVNAGSECGVKLNVIDEQTAGWDPVKAQDLMTNWIAAGHKPEAVISNNDNMAIGAINAMKAAGWDMKDVIVAGVDATQEALAYMKAGDLDVTVFQNAAAQGSGAVETAMKLAKGEAVTSPVWVPFELVTPANMDQYTTKN*