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cn_combo_scaffold_2069_11

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(13983..15635)

Top 3 Functional Annotations

Value Algorithm Source
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC= similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 550.0
  • Bit_score: 1011
  • Evalue 4.00e-292
choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 550.0
  • Bit_score: 997
  • Evalue 1.20e-288
choline dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000374898F similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 550.0
  • Bit_score: 1057
  • Evalue 0.0

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Taxonomy

Mesorhizobium alhagi → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1653
ATGCTTGAAGCAGATTTCGTAATCGTCGGCTCCGGCTCCGCCGGTGCAGCCATGGCCTATCGTCTGTCGGAGGACGGCAAGCACTCGGTCATCGTCATCGAATATGGCGGCACCGATTTCGGCCCGCTCATCCAGATGCCTTCGGCCCTGTCGATCCCGCTCAACATGAGCCGCTATGACTGGGGGTATGCCAGCGAGTCCGAGCCGCATCTCGGCGGCCGCGTGCTTGCCACCCCGCGCGGCAAGGTTCTCGGGGGCTCGTCCTCGATCAACGGCATGGTCTATGTGCGGGGCCACGCGCACGACTTCGACCACTGGGCCGAGCAGGGCGCAACTGGCTGGGGCTACGCCGACGTGCTCCCCTATTTCAAGCGTATGGAGCACGTGTCAGGCGGCGAGGACGGCTGGCGCGGCACCAAGGGACCGCTGCATGTGCAGCGCGGGCTACGCAAGAATCCGCTCTATCAGGCCTTCGTCGAGGCCGGCCACCAGGCCGGCTTCGAACTCACCGATGACTACAACGGCTCGAAGCAGGAAGGTTTCGGGCCGATGGAGCAGACCATCCACAGGGGCCGTCGCTGGTCGGTTGCCAACGCCTATCTGCGTCCGGCGCTCAAGCGCGGAAACGTACGCATCGTCAATGGTTTCGCCCGGCGTGTGGTGATGGAGAATCAACGCGCGGTTGGCGTCGAATTCGAAGCTCGCAAGAAGATTCAGGTCGTTAAGGCGCGACGTGAAGTGATCGTGGCGGCCTCGTCGATCAATTCGCCGAAGCTTTTGATGCTGTCGGGCATCGGGCCTGCCGAGCACCTCAGGAAACATGGCATCGAGGTGGTGGCCGACCGAAAGGGTGTCGGCCAGAATCTCCAGGACCACATGGAGCTGTACATCCAGCAGGAAGCGACGCAGCCGGTGACGCTGCACTCCGTGCTGAACCCGTTCTCCAAGGCGCTGATCGGGGCCGAGTGGCTGCTGTTCAAGAGCGGCCTCGGCGCCACCAACCACTTCGAGGCGGCGGCATTCGTGCGTTCGGCAGCGGGTGTCGACTATCCCGACATCCAGTTCCACTTCCTGCCAGCCGCGATCCGCTACGACGGCAAGGCAGCCGCCAAGTCGCATGGTTTCCAGGTCCATGTCGGGCCGATGCGGTCAAAGTCGCGCGGCTCGATCAGCCTGCGCTCGAGCGACCCGTGGGCCAAGCCCGAAATCCGCTTCAACTATATGTCCCATCCGGACGACTGGAGGGACTTCCGCCACTGCATCCGCCTCACCCGCGAACTCTTCGCGCAATCGGCGTTCGACCCGTTCCGCGGTCGCGAGATCTCCCCCGGCAGCCACGTGCAGACCGACGATGAACTGGACACTTTCATCCGCGAGCATTCGGAGAGTGCCTATCATCCCTGCGGCACCTGCCGCATGGGCCGCGCCGACGACCCGACGAGCGTGGTCGACCCCGAATGCCGAGTGATCGGCGTCGAGGGCCTGCGCGTCGCGGACTCGTCCATCTTCCCGCGCGTCACCAACGGCAATCTCAACTCGCCGTCGATCATGACCGGAGAAAAGGCCGCCGATCACATCCTCGGGCGGACGCCGCTTGCACCGTCCAACCAGGAGCCGTGGATCAATCCGCGCTGGCAGGTCTCGGACAGATAG
PROTEIN sequence
Length: 551
MLEADFVIVGSGSAGAAMAYRLSEDGKHSVIVIEYGGTDFGPLIQMPSALSIPLNMSRYDWGYASESEPHLGGRVLATPRGKVLGGSSSINGMVYVRGHAHDFDHWAEQGATGWGYADVLPYFKRMEHVSGGEDGWRGTKGPLHVQRGLRKNPLYQAFVEAGHQAGFELTDDYNGSKQEGFGPMEQTIHRGRRWSVANAYLRPALKRGNVRIVNGFARRVVMENQRAVGVEFEARKKIQVVKARREVIVAASSINSPKLLMLSGIGPAEHLRKHGIEVVADRKGVGQNLQDHMELYIQQEATQPVTLHSVLNPFSKALIGAEWLLFKSGLGATNHFEAAAFVRSAAGVDYPDIQFHFLPAAIRYDGKAAAKSHGFQVHVGPMRSKSRGSISLRSSDPWAKPEIRFNYMSHPDDWRDFRHCIRLTRELFAQSAFDPFRGREISPGSHVQTDDELDTFIREHSESAYHPCGTCRMGRADDPTSVVDPECRVIGVEGLRVADSSIFPRVTNGNLNSPSIMTGEKAADHILGRTPLAPSNQEPWINPRWQVSDR*