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cn_combo_scaffold_2096_8

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(6939..8501)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI000373D89F similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 505.0
  • Bit_score: 867
  • Evalue 8.30e-249
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:CDX32008.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 513.0
  • Bit_score: 804
  • Evalue 7.10e-230
sigma-54 factor interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 511.0
  • Bit_score: 795
  • Evalue 6.60e-228

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGATCCACATCCAAAAGGCGGCAACGGGCACATTCCGGATATACATGGCAGGTTCGATTCTCATAGTCGATGACGATCCGGTTCAGCGTCGTCTGGTCGATGCGGCGGTGACGAAATTCGGCCACACGGCGCTGGCCGTCGATGGCGGCGAAGCGGCGCTGCGCGTGCTCGACGGGCCGCACGGCGGCGATGTCGGCGTGATCATCCTCGACCTCTCCATGCCCGGCCTCGACGGCATCGGCGTGCTCAAGGCGATGCGAGAGCGCCAGATCTCCGTGCCGGTCATCGTGCAGACGGCCCAGGGTGGCATCGACACGGTGGTGTCGGCGATGCGCAACGGCGCCTTCGACTTCGTCGTCAAGCCGGCGTCGCCCGAAAGGCTGCAGACCGCGATCACCAATGCGCTCAAGGTCGAGGCGGCGGGTGGCGAGGTGCGGCGCTCGGTGCGCCGCGGCAGCGGCCTGCTCACCTTCCGCGACCTCGTCACCCGCAGTCCGGCCATGGATCGCGTCATCCGGCTCGGGCAGAAGGCTGCCGCCTCGAACATCCCGATCCTCATCGAAGGCGAATCGGGCGTCGGCAAGGAACTGGTCGCCCGTGCCATCCAGGGATCGGGCGATCGCCGCTCGAAGCCCTTCGTCACCGTGAACTGCGGCGCGATCCCCGAAAACCTGGTCGAGAGCATTCTGTTCGGGCACGAGAAGGGCTCGTTCACCGGCGCCACGGACAAGCACACCGGCAAATTCGTGGAAGCCAACAACGGCACGCTCTTCCTGGACGAGATTGGCGACCTGCCGCTCGACGTGCAGGTCAAGCTGCTCCGGGCCGTGCAGGAAGGCGAGGTCGATCCGGTCGGCGGCCGCTCGACGGTCAAGGTCGACATCAGGCTGATCTCGGCGACGCACCGCAATCTGCTGGAACAGGTCAAGGACGGGAAGTTCCGCGAGGACCTGTTTTATCGCCTCAACGTCTACCCGATTTTCGTGCCGCCGCTGCGCGACCGCCGCGACGACATCCCGCTGCTCGTCGGCCACTTCATCTCGCGCGTCGCGCCGGCGAGCCCGCACGGGCGCATACCGGCGATATCGGAAAGCGCGCTCGCATTGCTTCGAGCTTATGACTGGCCGGGCAACATCCGCCAGTTGGAGAACGCGGTGTTCCGTGCCTGCGTCCTGTCGGAAGGCGACGTGCTGACCGAGGAGGAGTTTCCGCAGATCCGCGCCCAGGTCGAGGGAACGGTCGATCTCGGCGGCGAGTCGCCGTCCGCTGTGCCGGCCCACGCCGTGAATGGCGGGGCCGTCGAGCGGGTAGAGCACCCTACGCTTCCGCCGGTCCAGGAAAGGCCGCGGCCAGGCACCCTTCGGGCCATCGACGAGCGCGGCAACGTGCGGGCTCTGGCCGATGTCGAGTTCGAGATGATCAGGCTCGCCATCGACCACTACAACGGCCAGATGAGCGAGGTCGCCCGGCGGCTGGGAATTGGCCGTTCGACGCTGTACCGGAAGCTCAAGGAGTATGGCATCGACCCTGAGTCGGGCCGGCCCGAGCGCTTCGCGACGTGA
PROTEIN sequence
Length: 521
MIHIQKAATGTFRIYMAGSILIVDDDPVQRRLVDAAVTKFGHTALAVDGGEAALRVLDGPHGGDVGVIILDLSMPGLDGIGVLKAMRERQISVPVIVQTAQGGIDTVVSAMRNGAFDFVVKPASPERLQTAITNALKVEAAGGEVRRSVRRGSGLLTFRDLVTRSPAMDRVIRLGQKAAASNIPILIEGESGVGKELVARAIQGSGDRRSKPFVTVNCGAIPENLVESILFGHEKGSFTGATDKHTGKFVEANNGTLFLDEIGDLPLDVQVKLLRAVQEGEVDPVGGRSTVKVDIRLISATHRNLLEQVKDGKFREDLFYRLNVYPIFVPPLRDRRDDIPLLVGHFISRVAPASPHGRIPAISESALALLRAYDWPGNIRQLENAVFRACVLSEGDVLTEEEFPQIRAQVEGTVDLGGESPSAVPAHAVNGGAVERVEHPTLPPVQERPRPGTLRAIDERGNVRALADVEFEMIRLAIDHYNGQMSEVARRLGIGRSTLYRKLKEYGIDPESGRPERFAT*