ggKbase home page

cn_combo_scaffold_2317_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5443..5688

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Hoeflea sp. 108 RepID=UPI00035D1CA6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 81.0
  • Bit_score: 164
  • Evalue 5.40e-38
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 81.0
  • Bit_score: 161
  • Evalue 7.50e-38
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1287326 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 81.0
  • Bit_score: 161
  • Evalue 3.80e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LSJC269B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGGCGGAACGATCGCAGAATCTTCAGGACCTTTTCCTGAATTCAGTTCGCAAGAGCAAAAACCCACTCACCATTTTCCTTATCAACGGCGTGAAATTGACCGGGGTAGTCACCTCCTTCGACAATTTCTGTGTATTGTTGCGCCGTGACGGGCACTCCCAGCTCGTCTACAAACATGCCATCTCCACGATCATGCCGAGCCAGCCGGTTCAGATGTTCGATGGCGAGGAAAGCCAGGGCGGCTGA
PROTEIN sequence
Length: 82
MAERSQNLQDLFLNSVRKSKNPLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHAISTIMPSQPVQMFDGEESQGG*