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cn_combo_scaffold_2462_12

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9948..11195)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035E48A4 similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 411.0
  • Bit_score: 706
  • Evalue 1.50e-200
ECF-family sigma factor {ECO:0000313|EMBL:CCV10333.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 70.0
  • Coverage: 404.0
  • Bit_score: 540
  • Evalue 1.50e-150
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 411.0
  • Bit_score: 535
  • Evalue 9.90e-150

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
GTGCCAGACGTCGCGGACAGCGCGCGGGCGGCGGCCGAAACGGCCGCCCGCCAGAGCTACGGCAAGCTCGTCGCCTTCCTCGCCGCCCGCTCGCGCGATGTCGCCGGCGCCGAGGACGCGCTCGCCGATGCTCTCGCCGAGGCGCTTACCCGCTGGCCGCAGTCGGGCGTGCCCGCCAACCCCGAGGCCTGGCTTTTGACGGTCGCCCGGCGGCGCACGACCGACCGACACCGTCGCAGGGCAGTCCGCGAGGCGGCGCTGCCGCATCTCAGGCTGATCGGCGAGGAACTGGAGGAGGAGGCCGTGCGCGACAAGCTGCCCGACGAGCGCCTCGGCCTGCTGTTTGCCTGCGCCCACCCCGACATCGATCCGTCCGTGCGTGCGCCTCTCATCCTGCAGACCGTGCTCGGCTTCGATGCCGCCACCATTGCCTCGGCCTTCCTCGTCTCGCCGGCGACCATGGGCCAGCGGCTGGTGCGGGCCAAGGCGCGCATACGCCAGGCCGGCATTCCCTTCCGCGTTCCCGAAAGGCCGGAAATGGCCGAACGGCTGTCGGCCGTCCTTGAGGCGATCTATGCCGCCTTCTCCGAAGGCTGGGCGGATGCCAGCGGCGCCGAATCCCGCCGCCGCAACCTGGCCTCCGAGGCCATCTGGCTCGGGCGGCTTGTAGCAGGCCTGATGCCCGACGAGCCGGAGGCGCTTGGCCTTCTGTCGCTGATGCTCCATGCCGAGGCGCGCCGGCCGGCGAGGCGCGATGCCGATGGCGCCTTCGTGCCGCTCGCCGACCAGGACACGGGGTTGTGGGATGCCGGTCTCATCGCCGAGGCCGACGCGCTCCTGGTCCGTGCCGGGACCCTGGAATCCATGGGCCGATACCAGATAGAGGCGGCGATCCAGTCCGTCCACGCCGCCCGCCGCATCCTCGGCCGCACCGACTGGCCCGCACTCGCGGTCTTCTATCAGGCGCTGACCACGGTCACCGCGTCGCCCGTCGCCGCGGTCAACCGCGCCGTGGCCATCGCCTTTGCCGGCAAGCCGTCAAAAGGTCTGGAGATGCTCGATGCGATCGGCGACGCAAGGCTCGACCAGTACCAGCCCTATTGGGCCGCCCGTGCCGAGTTGCTGTCGATGGTCGGCCGCTCGGACGAGGCTGCCAGCGCCTACACCCTTGCCATCGGCCTTGAGACCGATCCCGCGGTGCGGGCGTTCCTGGAGCGGAAGAGGGCAGGGGTTTTGACGTCTGGCTGA
PROTEIN sequence
Length: 416
VPDVADSARAAAETAARQSYGKLVAFLAARSRDVAGAEDALADALAEALTRWPQSGVPANPEAWLLTVARRRTTDRHRRRAVREAALPHLRLIGEELEEEAVRDKLPDERLGLLFACAHPDIDPSVRAPLILQTVLGFDAATIASAFLVSPATMGQRLVRAKARIRQAGIPFRVPERPEMAERLSAVLEAIYAAFSEGWADASGAESRRRNLASEAIWLGRLVAGLMPDEPEALGLLSLMLHAEARRPARRDADGAFVPLADQDTGLWDAGLIAEADALLVRAGTLESMGRYQIEAAIQSVHAARRILGRTDWPALAVFYQALTTVTASPVAAVNRAVAIAFAGKPSKGLEMLDAIGDARLDQYQPYWAARAELLSMVGRSDEAASAYTLAIGLETDPAVRAFLERKRAGVLTSG*