ggKbase home page

cn_combo_scaffold_2504_9

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(9030..12527)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C2EA5 similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 999.99
  • Bit_score: 1473
  • Evalue 0.0
Type VI secretion protein {ECO:0000313|EMBL:ESY06257.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 999.99
  • Bit_score: 1467
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 999.99
  • Bit_score: 1419
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNJC399B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3498
ATGAACGGCTGGCTTCTGCGGATTGCGAGCATCGCGGCACTGCTGGGGCTGGCCGCCGCGATCTGGTATGCCGGGCCGCTGATAGGCTTCGGCGATGCCCGCCCCTTGGCACCGGCATGGTTACGGCTGCTGGTCATTGCGACGCTTGTCCTCGCATTGGGGGGCTATTACCTGTTGCGGTTCTTTCGCGCCCGATCAGCCGAACGCGCGCTCGAAGCCGCGTCTTCGCGCTCCGCCGATAGGGATGGCGACGCCCTAGCGCTCGAACGAAGCATGCAAAAGGCAATCGAGGCACTGAGGCGCGCCAGCGGCCGCCGCAACTTCCTCTACGAAGTGCCCTGGTACGTCATTATCGGCCCGCCCGGGGCGGGCAAGACGACCGCCCTGGTCAATTCCGGCCTCAACTTTCCCCTCTCCGTTTCCGGATCGGCCCAGCCCGTGCCAGGCGTTGGAGGCACACGCAACTGCGACTGGTGGTTTACCGACAAGGCGGTCCTGATTGACACGGCCGGACGCTTCGCGACCCAGGACTCCGATCCCTCGCGCGATCGCAGGGATTGGCTGGACTTCCTTTCCCTGCTGAAGAAGTATCGGGCGTCTCAGCCCATCAACGGCGTAATCGTCGCGGTCAGCCTTTCCGACCTCATGGTCACGAAGGATGGCCTCGAGGGACAAGTCTCCGATCTCCGGAGCCGGCTGCGTGAGATGCACGAGACGCTGAAGATCACCTTTCCGGTCTATATCCTGTTCACGAAGGCAGACCTGATCGCCGGTTTCATGGAGTATTTCGGCAATTTCGACGAGATGCGCCGCCGTATGGTCTGGGGGGCGACATTCCAGACTGCGGACCTGCAGGCGAACCTGGTCGGCGAGACACCAGCCGAATTCGAAGAACTTGCGCTGCGACTATCGGAAGACTTGCCGGATCGGCTCCAGGAGGAGCCCGATCCAGTCGCTCGCATCTCGATCTTTCGCTTCCCCGCCCAGTTCGCATCGCTACGGCAACGGTGCACCGATCTTCTCGGGCGTTTTTTCCCGCCGGAGAAAGGGGCTGGCTTCCTGCCCCGGGGGTTCTATTTCTCTTCCGGTACCCAGGAAGGCACCCCTTTCGACCGCATTCTCGGCACGATGGGGAGAAGCTTCGGAGCCGTGCCTCACCTCTCGGGGACGGGAAAGAGCTTCTTCCTCCACGACCTTCTGGCAGAGGTGGTTTTTGCCGAATCCGGCTGGGTGTCATTCGACAGATCCGCGGAAAGGCGGGCTCGCTTGGGCCGGCTCGCCGGCATCACCGCGGTCGGCCTCGGAATTGCGGCCGCACTTGGAGCTCTGGGAGTGAGCTTCAAGGCCAATCGCGAGCTTGTTGCGTCGACCGACGCGGCCGCCGAGGCGTATCGCAAGGCAGCCGGCGCTGAACTCACCGGCCAGAGCATCGCGGACGCAGATCTGGGCACCGTCATCGACGCGCTCGAAGCCATACGGAGCCTTCCTGCGGGCTACGAGTACCGCGAGCAACCGGTATTGCCGCACGAAACGCTCGGCATGAGCCAGCGCGAGCGGCTTCAGTCGGCTTCTGTGAGCGCCTACCGTCAAGCGCTCGAGCGGATGTTCCGTCCAAGGCTGCTGCTGCAGCTAGAGCAGGCCATCGAAGCCGGCATCGGCGATCCGGCCACTCTTTACGAGCCGCTCAAGACCTACCTCATGCTCGGCGGCAAGGCTCCGAAGGTGGACGACGACGCCATCGTCGCCTGGTTGACGAGGGACTGGGAGGTGAACCGGTATCCCGGATCGCAGAACCGGGAAGGACGGGAAGCCCTAGAAAAGCATCTCCGCGCCATGCTGGCTCTCGACGACGAATACGATGTCGCCGTCGAACTGAACCGCCCGCTGGTGGAGTCGGCCCAGCGGTCGCTCGGGCGCATGACGGTGGCCGACCGCGCTTCGGCGCTCATCGCCGCCGCCTCGCCTGCAGTCCCGCCTGATTTTGCGATCGCCGCCAAAGCGGGCCCGGAGGGACAGCTTGTCTTCGAGACCGTGGATGGGAGCGAGCTCTCGGCCCTGCGCGTCCCAGGGATCTATACCTATTCGGGTTTCCACGATTTCTACCTTGAGCAGTTGTCGACTGTCGCCCAGAAGCTCGCCGACGAGCAATGGGTGATCGGGAGCGGCGGCGAACAGGGCGGAATCGAGCAAGATCTGTTGCAGTTGGGGCCAGAACTGCTGGACCGCTATTCGACCACTTTTTCAAAGGCATGGAACGATGTGCTCGACCGGCTCAAGCTCAAGTCCATGTCGGCCGACAAACCGAAATACGTTACTTTGTCGGCGGCCGGCGCGGCCAATTCGCCGCTCGCCCAGCTTTTCGAGGCGATTGCCCGCGAAACGGCGCTGACGCGTGGAACAACCAACACCGTCGATGAGGTAGCGCAGGCCGAAGGGCTTGCACGGATAGGCATCGAGACGGCAGGTCGCAAGTCGGCCAGCCGCGCTGGCACCGCCTCCAGCCCAGGCGAACAGGTTCCGGGCGCCAATATCGAGGCACAGTTCCGGCCATTCCACCTCCTGGTCGACGGGCGTCCGGGCCAGCGTCCGATCGATGCCCTGATCCAGAATTTCCGGGCGATGAGGCAGAGCCTGACGATCGCGGCCGCAGCCCCGTCTCAGGCCGACCGCGTCAATGCCAACCTCCAGCTGCAAATCTCCAACCTGCGCGCCAACGCCTCGCGACTGCCCAAGCAACTTGCCCGGATGGTTCAGGCCGCGGCCGACGACTTCGAGGTCGACGTCGCATCGGCTTCTGCTGCGCAGCTTGGCGAACAGCTCAAGGACACGGTGACCGGGCCGTGCCAGGATCTGATCGGCAATCGCTTTCCGTTCAGGCCATCTGCGACCGAAGACGTGTCGATCGCCGACTTCGCTCGGCTGTTCGGCCCCGGTGGCACCATGGACAGGTTCTTCGCCCAGAACCTCGCCCAGCTTGCCGACACCTCAAGGCAAGACTGGTCCTGGAACCAGGATACGCAACTCGGACGCTCCTTTTCCGCTGCGACGCTGAAGCAGTTCCAACTCGCGGCGCAGATCAGGGACGCCTTCTTCCCGCTTGGAGGGTCGACCCCCGCAGTCAACCTGACCTTCACGCTGTTGTCCCTGCACGGCGACGCGGACATGGCGTTGCTCGACGTCAACGGGCAGATCGTGCAGAGCTACCAGACGGGTAGCAGTCCGGCGGTTGTGACATGGCCGGGCACGAACGTGGCGGGGTCGGCGCATCTCAGCCTCACTCCCGAGTTGCCGGGCCGTGACTCCGCGATCAAGTTCGATGGTCCGTGGGCGCTCAAGCGGCTGCTCGACACGGCAACCGCCAACCGCAATGGCGACAACCTCGAACTGCGCTTCGTGATCGGAGGCCGCGACGTGGCCTATACCGTTCAGGTCAACCCGCCCGGCAACCCCTTTGCGCTGCCGGCCTTTTCGGAGTTCGCCTGTCCGAGCGATCTCTGA
PROTEIN sequence
Length: 1166
MNGWLLRIASIAALLGLAAAIWYAGPLIGFGDARPLAPAWLRLLVIATLVLALGGYYLLRFFRARSAERALEAASSRSADRDGDALALERSMQKAIEALRRASGRRNFLYEVPWYVIIGPPGAGKTTALVNSGLNFPLSVSGSAQPVPGVGGTRNCDWWFTDKAVLIDTAGRFATQDSDPSRDRRDWLDFLSLLKKYRASQPINGVIVAVSLSDLMVTKDGLEGQVSDLRSRLREMHETLKITFPVYILFTKADLIAGFMEYFGNFDEMRRRMVWGATFQTADLQANLVGETPAEFEELALRLSEDLPDRLQEEPDPVARISIFRFPAQFASLRQRCTDLLGRFFPPEKGAGFLPRGFYFSSGTQEGTPFDRILGTMGRSFGAVPHLSGTGKSFFLHDLLAEVVFAESGWVSFDRSAERRARLGRLAGITAVGLGIAAALGALGVSFKANRELVASTDAAAEAYRKAAGAELTGQSIADADLGTVIDALEAIRSLPAGYEYREQPVLPHETLGMSQRERLQSASVSAYRQALERMFRPRLLLQLEQAIEAGIGDPATLYEPLKTYLMLGGKAPKVDDDAIVAWLTRDWEVNRYPGSQNREGREALEKHLRAMLALDDEYDVAVELNRPLVESAQRSLGRMTVADRASALIAAASPAVPPDFAIAAKAGPEGQLVFETVDGSELSALRVPGIYTYSGFHDFYLEQLSTVAQKLADEQWVIGSGGEQGGIEQDLLQLGPELLDRYSTTFSKAWNDVLDRLKLKSMSADKPKYVTLSAAGAANSPLAQLFEAIARETALTRGTTNTVDEVAQAEGLARIGIETAGRKSASRAGTASSPGEQVPGANIEAQFRPFHLLVDGRPGQRPIDALIQNFRAMRQSLTIAAAAPSQADRVNANLQLQISNLRANASRLPKQLARMVQAAADDFEVDVASASAAQLGEQLKDTVTGPCQDLIGNRFPFRPSATEDVSIADFARLFGPGGTMDRFFAQNLAQLADTSRQDWSWNQDTQLGRSFSAATLKQFQLAAQIRDAFFPLGGSTPAVNLTFTLLSLHGDADMALLDVNGQIVQSYQTGSSPAVVTWPGTNVAGSAHLSLTPELPGRDSAIKFDGPWALKRLLDTATANRNGDNLELRFVIGGRDVAYTVQVNPPGNPFALPAFSEFACPSDL*