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cn_combo_scaffold_2504_12

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 15488..17815

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein Rhs n=1 Tax=Hoeflea sp. 108 RepID=UPI00036993E9 similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 775.0
  • Bit_score: 1320
  • Evalue 0.0
Type IV secretion protein Rhs {ECO:0000313|EMBL:ESZ09819.1}; TaxID=1287120 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobi similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 775.0
  • Bit_score: 1315
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 775.0
  • Bit_score: 1244
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. L2C089B000 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2328
ATGGCAACCGATCGTGCTACAGTGGTCCGGACACCTCTTGGCGCCGATACGTTGACCTTCACTCATCTCCTCGGTCGGGACGAGGTGAGCCGCTGTTTTGCCTTTACGGTCGGCTTCGTCAGCACCGACCAGGCCATCGATCCCCTGGAGATGCTTGGCGGCGCAGTGTCGGTCGAGGGCGAGTCCGACCCCAAGCGCTGGTTCAGCGGCCTAGTCGCGGAGTTCCGCCTCGCTCGGATCGAAGACCGGCTGGCCTATTATGAGGCCGTCGTCAGGCCTTGGTTCTGGTTTCTCGGCAACACCACCGACTGCCGCATCTTTCAGAACATGACCGCCATCGAGATCGTCGAGAAGATCTTCTCCAAATACGGCACGGCTAAATTCGAGAAGCGGCTGCAGGGCTCCTATCCGACCCGCGACTACTGCGTTCAGTACGATGAAAGCGACCTGGATTTCGTGCAGCGCCTGCTCGAGCACGAAGGCGTCATGTACTTCTTCGAGCATGCCGACGGCGAGCACAAGCTGATCCTGGCGGACGCCATGAACAAGCTGAAGCCGGCGCCGGGTTACGACAAGGTGCCTTATCATTTCGAGGGGCAGGCGACCCGCCGCGATATCGAATATATCACCGAATGGATCCCCGGCAGTTGCGTGCGCCCCGGAGCCTATGCCCACACAGATTTCGACTTCAAGAAACCCGGCGCGGACCTGATGGCGAAGTCCGACCAGGCCTTCGGACATAAGCTGGCTTCGGGCGAGCACTACCGCCAGCCCGGTGCGCATCTCGACGTCGGGCGCGGCGACAGCATCGCCGGCATACGGCGCGAGGAGCTCCAGGCGGTTCATCACCGCATCGCCGCCGCAGGCACCGTGCGCGGTCTCTTCTCGGGGTGCACCTTCACTCTGGACGGTTTTCCGCGCGACGACCAGAACCAGGAATATCTGGTTCTCAGCGCCGAATACCGCATCTACGATCCGGGCTACCGCAGCGGCGTAGACACACAGGGCGAAAACTTCACCGTGGTGCTGGGCCTAGCTCCCACCAGCCTGCCGTACCGTCCGCCCCGGATCACGCCGCGCCCGATCATGCGCGGGCCGCAGACTGCCACTGTGGTCGGCCCTTCGGGCGAGGAGATTTTCACCGACGAATATGCGCGGGTGAAGGTGCAGTTCCATTGGGACCGCCTCGGCAAGAAGGACCAGAACAGCTCATGTTTCGTGCGCGTGTCGCAGACCTGGTCCGGTAGCGGATTCGGCTTCATCCAGATCCCGCGCATCGGCCAGGAGGTGATCGTCGATTTCATCGAAGGCGATCCGGACCTGCCGATCATCACCGGCAGGGTCTACAACGCCTCCCAGATGCCGCCATACGGCCTGCCTGGCAACGCCACGCAGTCCGGCCTCAAGACCGAGTCCTCAAAAGGCGGGGGCGGTTACAACGAGCTGATGTTCGAGGACAAGACCGGCTCCGAGCTGGTCAATTTCCAGGCGCAGAAGGACCACAACCTGCTCATCAAGCACGATCGCACCAAGCTCGTGCAGCACGACCAATCGGATCGCATCGACAACAACGCCAAGCACTCGGTGGGCGTCAACCTCGACGAGGACGTCGGCAAGAACAAGACGGTCAAGGTCGGCGTCGACCAGAAGACGGACATCGGCTCGAACGACACCGAGACGGTGGGCACCAATCGCTCGTTGAGCGTGGGCTCGAACGAGACCATCAAGATCGGCTCCAATTCGAGCGAGACGATCGGGGCCAACCACACCCAGACCGTTGCCATCGCCCAGGCGATCACGGTGGGCGCAGCCCGTGTCGACACGGTCGGTGCGACCGAGACCCGCAGTGTGGGTGCGGCCCAGACCAACACGATCGGCGCCAGCCGCTCGGTCAGCGTGGGCGCTGCACAGAGCCACAGTATCGGCGCCGACGACAGTTGGCAGATCGCCGCGAACCAGAGCGTGCAGATCAGCGCCGACCAGACATTCGAGGTCGGGGGTGCGAAGTCGACGACCATCGGCAAGGCTCGCAGTACCAAGATCACTGACGGGGATACCACCGAAGTCGGCGGCGACCGTGCCCTGAAAATTGCCAAAGGCAGCTTGGTTGATGTCGGCGAAGGGGCGGCCATAAAGGTGGGCAAGGACCTCTTGATCGAGGCCGGCGATTCCATCGTCATCAAATGCGGATCGGCGGCGATCTCGATGAAGAAGGACGGCACCATCAACGTCGAAGGCAAGGACATCACGGTCCTCGGGTCGGGTAAGATAAACGTCAAGGCATCAAGCGACATCACCATGAAGGGTTCGCAGATCAAGCAGAACTGA
PROTEIN sequence
Length: 776
MATDRATVVRTPLGADTLTFTHLLGRDEVSRCFAFTVGFVSTDQAIDPLEMLGGAVSVEGESDPKRWFSGLVAEFRLARIEDRLAYYEAVVRPWFWFLGNTTDCRIFQNMTAIEIVEKIFSKYGTAKFEKRLQGSYPTRDYCVQYDESDLDFVQRLLEHEGVMYFFEHADGEHKLILADAMNKLKPAPGYDKVPYHFEGQATRRDIEYITEWIPGSCVRPGAYAHTDFDFKKPGADLMAKSDQAFGHKLASGEHYRQPGAHLDVGRGDSIAGIRREELQAVHHRIAAAGTVRGLFSGCTFTLDGFPRDDQNQEYLVLSAEYRIYDPGYRSGVDTQGENFTVVLGLAPTSLPYRPPRITPRPIMRGPQTATVVGPSGEEIFTDEYARVKVQFHWDRLGKKDQNSSCFVRVSQTWSGSGFGFIQIPRIGQEVIVDFIEGDPDLPIITGRVYNASQMPPYGLPGNATQSGLKTESSKGGGGYNELMFEDKTGSELVNFQAQKDHNLLIKHDRTKLVQHDQSDRIDNNAKHSVGVNLDEDVGKNKTVKVGVDQKTDIGSNDTETVGTNRSLSVGSNETIKIGSNSSETIGANHTQTVAIAQAITVGAARVDTVGATETRSVGAAQTNTIGASRSVSVGAAQSHSIGADDSWQIAANQSVQISADQTFEVGGAKSTTIGKARSTKITDGDTTEVGGDRALKIAKGSLVDVGEGAAIKVGKDLLIEAGDSIVIKCGSAAISMKKDGTINVEGKDITVLGSGKINVKASSDITMKGSQIKQN*