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cn_combo_scaffold_2504_22

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(28027..29361)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000382E92E similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 444.0
  • Bit_score: 801
  • Evalue 4.80e-229
type VI secretion protein, vc_a0114 family similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 444.0
  • Bit_score: 795
  • Evalue 5.70e-228
Type VI secretion protein, VC_A0114 family {ECO:0000313|EMBL:ADV15356.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 444.0
  • Bit_score: 795
  • Evalue 2.80e-227

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGACCGAAACGAACAGGGTGCTGTGGTCGGAAGGCCTTTTCCTCAGGACGCAGCATTTTCAGCAGCAGGACCGCTTCTTCGAAGGGACGGTACGCGGCGCGCTCCAGGCGGGCCAGCTCCACACCTTCGGCTTCAGCAAACTGACGCTGGATGCGGCGCTGCTCGAGGTCGGCCAGGTCGCGGTCACCTCCGCCCGCGGGATATTCCCGGACGGCACGCCCTTCATGATCCCGGAGACGATGGACGCGCCGAGGCCGCTTGCGGTCACCGCGGACACGGGCGCAGGTCCCGTGCTGATCGCACTGCCCCTCGAGCCTCCCGGCGGAGTGGGGTTCGATCCTGCCCATGCCGACTCCTCGGGCGCCCGCTATCGCGGACGGATCGTCACTGTGCGCGACGCTGTCCGTGGCGGAGCCGATGCCGAAGAGGTCGAGATCGCCAGGCCCCAAGCCGTGCTGCTTGCGCCCGGAAAGGACGTCGGCGGCTACACCGCCCTGCCGGTGACGGAGATCAAGGGCATCCGGGCGGACGGCGGGATTGCGCTCGAGGACACCTTCCTGCCGCCCACCCTCGCGACCGGTGCGGTGGCCTGGTACGCGCAACTCCTGCAGGAGATGATCACAGGTCTCGATCAGATCGCCGAGGCGCATGCCAAGATGGTGCTTGGCGGACCGGGGCGCAGCGTCGAGGACCTGCTGATGCTGCATCTCGCCAATGCGGCGCGCCCGCGGCTCGCGCACATGCTGGCGCAGGATATCTTCCACCCCGCCCACCTCTACATGGAACTGGCCGGCCTGGCCGGTTCGATGGCCACCTACGGTTCGAATTCGCGCCGCCTTGCCGAACTGCCCGTCTACGACCACATGGCGCCCGGACCGGCGTTCTCCGCACTTGCAGACACGCTCCGGTCGCTGATCCTGAGCCTTCGCTATGTCGAGCCGAAGTCGCGCGCCCTTCCCGTGATGCGTCATTCGACCAATGTCTGGAAGGTGCGCATCGACAACCCGAAGCTGCTTGTCTCGAGCCGCATCGTCATTCGCGTCGGGTCGGAACTCTCCGAGGATGCGCTACGCAAGATCTTCGTCAACCAGGCAACGGTCGGCGCCGCCGGCGAATTCGAGGGTCTGTGGAAGTCCCGCCTGCCCGGCATCCCCTTGAAGCCGTTGCACTCGCAGCCCCGCGAAATCCCCTATGACGGCGACCGTCTCTGCCTGGAACTGGACCAGAAGAGCGAACATTGGGCCTCGCTGCTGGATTCCCCGGGCTTCGTGATCGGGGTTTCCGGAGTGCTGCCGAGCGAGCCCCAGGTCGACTGCTACTCGGTGAACAGGTGA
PROTEIN sequence
Length: 445
MTETNRVLWSEGLFLRTQHFQQQDRFFEGTVRGALQAGQLHTFGFSKLTLDAALLEVGQVAVTSARGIFPDGTPFMIPETMDAPRPLAVTADTGAGPVLIALPLEPPGGVGFDPAHADSSGARYRGRIVTVRDAVRGGADAEEVEIARPQAVLLAPGKDVGGYTALPVTEIKGIRADGGIALEDTFLPPTLATGAVAWYAQLLQEMITGLDQIAEAHAKMVLGGPGRSVEDLLMLHLANAARPRLAHMLAQDIFHPAHLYMELAGLAGSMATYGSNSRRLAELPVYDHMAPGPAFSALADTLRSLILSLRYVEPKSRALPVMRHSTNVWKVRIDNPKLLVSSRIVIRVGSELSEDALRKIFVNQATVGAAGEFEGLWKSRLPGIPLKPLHSQPREIPYDGDRLCLELDQKSEHWASLLDSPGFVIGVSGVLPSEPQVDCYSVNR*