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cn_combo_scaffold_2504_24

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(29858..31288)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003673FD9 similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 496.0
  • Bit_score: 643
  • Evalue 1.80e-181
Type VI secretion protein {ECO:0000313|EMBL:ESY73590.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 495.0
  • Bit_score: 601
  • Evalue 8.30e-169
type VI secretion system fha domain protein similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 498.0
  • Bit_score: 574
  • Evalue 2.90e-161

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Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGAGCTTGCTCCTCACGCTTGAGCACGGACCGCGCGCGCAGGCCATGCGCGAGGCCCGGCTGGACAAGGGTGACATGGTGATCGGTCGCAGTCCCGAAGCGGACTGGCAGATCGAAGACCCGGACATGTTCGTCTCGCGTGCCCACTGCAAGATCACGGCCAGCCACGACGGCTACTACGTGACCGACACCTCGAGCAGTGGCCTTTTCATCGACGATGCCGGCAGCCCGCTCGGTGCCGGGAACACGATGCGCCTGCAGAACGGCATGCGCCTGCGCATCGGCGACTACGTGGTCGGGGTCGATCTGCATTCGGCGGTTTCTGCCGGTCAGGCATCGCCATCGCAGCCGTCGTCGGGTTCGCATGCCTCGGTCAATCTCGGTTCGGACGATTTCTTTGCCCTCAAGACGGAGGAAGAGCCACAGCGTCGTCGCCCTGCCGAGTTGCCCAATCCGTTCGAGCAGCCGGAACCGGGCGCATTCCGTGCATACGAACGCGAAACTTCCGGGCGCAGTTCGCCGGCTTTCGACGACCCGTTCAGTCTCGATCCGGTGTCCACCCCTGCAACGCCTGAAACCGAAAAAGGGGGCGAAACCGGGACTTCGGCGTTCGGGGACCCGTTCGGCCTCGAAACTCCGCCGCCGCCCGAACCGCCACCCGCGCGACAGGCTCGGAGACAGGAAGTCCGGGTCGAGGACGTGGTCGTCCCCAGCGCCAATCGACGTTTCGAGGCCCCCTCAGAGCAGCAGCGCGGGGCGCACCCGTCGCCAGCCCCGTGGGACAGGCCTGTGCCGCGGAACGATGCGCCGCCGCCGCCCAAGGCTGAACCGAAGCCGGCGCGACGCACCGCGGAACCCGGCGACGTATCCCTGCGAGCGGCATTCCTGCGCGGCATGGGGCTCGACGAAAGCGAGATCCCGGCCCGGGACGCCATCGCCGAGATGGAGAAACTCGGCCGCGAGTATCGCCTGATGATGGAAGGCCTGATGCAGCTTCTGCGCAAGCGTGCCGAGGAGAAGGGCAACGCCCGCATCGAACAGACAGTGGTGGGCGCATCGGAGGTCAATCCGCTGAAATTCCTGCCCACTGTCGACGACGCGCTCGCGACCATCCTCGCCGAGCGCAGCCCGGGCTTCCTGTCAGGCGAGCCGGCGATCCAGGACGCGGTCTGGGACCTCGCCCATCACCACGTTCGTGCCTGGCGCGGCCTCCAGGGCGCGCTCAGGCGGATGATCGACCGGTTCGATCCCGCAGCCCTCGAGGAAGAGCTGAAGCAGAGTTCGTCCCTGGAGACGCTGCTCGCCGGGGGACGTGGAGCAAAACTCTGGGAACTCTACAAGAAACGCCACCGCGAGATCGCCATCAGCGCCGAGACGCGCTTCATGGGCGAGATCGGCGCCGATTTCCGCAACGCCTACGAGGAGGAGTGA
PROTEIN sequence
Length: 477
MSLLLTLEHGPRAQAMREARLDKGDMVIGRSPEADWQIEDPDMFVSRAHCKITASHDGYYVTDTSSSGLFIDDAGSPLGAGNTMRLQNGMRLRIGDYVVGVDLHSAVSAGQASPSQPSSGSHASVNLGSDDFFALKTEEEPQRRRPAELPNPFEQPEPGAFRAYERETSGRSSPAFDDPFSLDPVSTPATPETEKGGETGTSAFGDPFGLETPPPPEPPPARQARRQEVRVEDVVVPSANRRFEAPSEQQRGAHPSPAPWDRPVPRNDAPPPPKAEPKPARRTAEPGDVSLRAAFLRGMGLDESEIPARDAIAEMEKLGREYRLMMEGLMQLLRKRAEEKGNARIEQTVVGASEVNPLKFLPTVDDALATILAERSPGFLSGEPAIQDAVWDLAHHHVRAWRGLQGALRRMIDRFDPAALEEELKQSSSLETLLAGGRGAKLWELYKKRHREIAISAETRFMGEIGADFRNAYEEE*