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cn_combo_scaffold_2996_3

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(2358..3317)

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00036CF606 similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 319.0
  • Bit_score: 615
  • Evalue 3.50e-173
ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 316.0
  • Bit_score: 527
  • Evalue 3.50e-147
Binding protein-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:ENN85235.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiacea similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 319.0
  • Bit_score: 527
  • Evalue 1.00e-146

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Taxonomy

Rhizobium freirei → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGAGTTACGTGATACGTCGCCTACGGGCCTTTCCTTTGGTCCTCATCGGCGTCTCTATCATCGTCTTCATCGCCATCCGGCTGGTGCCGGGCGATTCCATCACGGCCATGCTGGGCACCGAGGCCGGCCTTCTGACCCCGCAGCAGCGGGATTCGCTCGCCGTCTATTTCGGCATCGACCAGCCTTGGCCGGTCCAGTACTGGCGCTGGTTCACCGGCCTGTTCAGCGGCGACCTAGGCATCTCGGTGACCTACGGCAAGCCTGTTCTGACGGTCATCCTCGAACGCTTTCCGCTGACGCTGGAACTCGCGCTGCTTGCCATGCTGATTGCGTTGTCGATCGGCGTGCCCGCCGGCGTCTTCGCCGCTACCCGCAACGAGCGTCCCGCCGATCTCGGTGTGCGCGTCGCCGCCATGATCGGCCAGTCGACACCGAGCTTTGTCGTTGGCCTCGTCATCATCTACATCCTGTCCGCCGGCTTCGGCGTTCTGCCCACCATGGGCGCGTTCACCCCGATCTGGCAGGACCCCTTGCAGAATCTCGGCCAGATGATCCTGCCGGCGATCACGCTCGGCTGCGCATTCGCCTCCTCGGTCACGCGCGTCACCCGTTCGGCCATGCTCGACGTTCTGAGCGACGATTATGTGCGCACGGCACGCAGCAAGGGCACGCCCGAGCGCCAGGTCATCTGGCGCCATGCGCTGCCTAATGCGCTGGTGCCCGTCGTCACGCTGAGCGGCATCGAGTTCGGATACCTGCTTGGCGGCGCCGTCATTGTCGAACAGATCTACGCCCTGCCGGGGCTGGGCCGCATGGTGCTGGAAGCCATCCTGCAGCGCGATTACGCGCTGGTGCAGGGTGCCGTTCTGTTCATCGCCCTCAACTTCATGATCGTCAATCTGCTCGTCGACCTCGCCTATGCTGCGCTCGACCCTCGCATTCGCCTGGAGGGCCGTTGA
PROTEIN sequence
Length: 320
MSYVIRRLRAFPLVLIGVSIIVFIAIRLVPGDSITAMLGTEAGLLTPQQRDSLAVYFGIDQPWPVQYWRWFTGLFSGDLGISVTYGKPVLTVILERFPLTLELALLAMLIALSIGVPAGVFAATRNERPADLGVRVAAMIGQSTPSFVVGLVIIYILSAGFGVLPTMGAFTPIWQDPLQNLGQMILPAITLGCAFASSVTRVTRSAMLDVLSDDYVRTARSKGTPERQVIWRHALPNALVPVVTLSGIEFGYLLGGAVIVEQIYALPGLGRMVLEAILQRDYALVQGAVLFIALNFMIVNLLVDLAYAALDPRIRLEGR*