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cn_combo_scaffold_3073_17

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 16993..18486

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Hoeflea sp. 108 RepID=UPI00037F0C24 similarity UNIREF
DB: UNIREF100
  • Identity: 98.2
  • Coverage: 498.0
  • Bit_score: 941
  • Evalue 2.50e-271
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyll similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 501.0
  • Bit_score: 894
  • Evalue 6.50e-257
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 502.0
  • Bit_score: 887
  • Evalue 1.60e-255

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Taxonomy

Mesorhizobium sp. ORS3324 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGGCGACAAAAGAAAAGGAAGAGGTCGAGACCGAACGCGAAGGCGCCCCCGACGGCCCCTTGCTCGACCTTTCCGATGACGCTGTCAAGAAGATGATCAAAGTCGCGAAGAAGCGCGGCTATGTCACCATGGACGAGCTCAATGCGGTGCTTCCCTCGGAGGAAGTAACCTCCGAACAGATCGAAGACACGATGGCGATGCTGTCCGACATGGGCATCAACGTGGTCGAGGACGACGAGCAGGGCGAAGAGGCCGAAGCCGCTGAAGGCGATGCCGAGGAAGACGCCAACGAGCTCGCCGAACAGACCGGCACGGCCGTTGCCGCCACCACGACCAAGAAAGAGCCGACCGATCGTACCGACGATCCGGTGCGCATGTACCTGCGCGAGATGGGTTCGGTCGAGCTTCTGTCGCGCGAGGGCGAAATCGCCATCGCCAAGCGCATCGAGGCTGGCCGCGAGACCATGATCGCCGGCCTGTGCGAAAGCCCGCTGACCTTCCAGGCCATCATCATCTGGCGTGACGAGCTCAACGAAGCCAAGATCCTGCTGCGCGAGATCATCGATCTCGAAGCCACCTATGCTGGCCCCGAGGCCAAGCAGGCCCCGATCGTCGAGCGTGTCGACGAGGACGCCAAGCCGAAGGAAGAGCCTAAGGCCGGGCGCCGCCGTGGCGGTGACGAGGAAGACGACATCACCAATGTCGGCGGCGACAATCGCGGCGAGGAAGAGGAAGAGGACGAGGACGAGGCCAGCCTGTCGCTGGCGGCCATGGAAGCAGAGCTCCGGCCGCAGGTGATGGAGACGCTCGACGTCATCGCCGACACCTACAAGAAGCTGCGCAAGCTGCAGGACCAGCAGGTCGAGAACCGTCTCGCCGCCGCCGGCACGCTGTCGCCGAGCCAGGACCGTCGCCTCAAGGAACTGAAGGACCAGCTCATCAAGGCGGTGAAGTCGCTGTCGCTGAACCAGGCCCGCATCGAGGCCCTGGTCGAGCAGCTCTACGACATCAACAAGCGCCTGGTGCAGAACGAAGGCAAGCTTTTGCGTCTCGCCGAGAGCTATGGCGTGCGCCGCGAGGAGTTCCTGAAGGAATACCAGGGCTCCGAGCTCGACCCGAACTGGATCCGCTCGATCTCGAACCTCACCAGCCGCGGCTGGAAGGAGTTCACCAAGAACGAGAAGGACGCGATCCGCGACCTGCGCTCCGAGATACAGAACCTCGCCACCGAGACGGCGATTTCGATCCTCGAGTTCCGCAAGATCGTCAACCAGGTGCAGAAGGGCGAGCGCGAGGCAGCGATCGCCAAGAAGGAAATGGTCGAGGCGAACCTCCGTCTCGTCATCTCCATCGCCAAGAAGTACACGAACCGCGGCCTGCAGTTCCTGGATCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCGACAAGTTCGAGTACCGCCGCGGCTACAAGTTCTCGACCTATGCCACCTGGTGGATCCGGCAG
PROTEIN sequence
Length: 498
MATKEKEEVETEREGAPDGPLLDLSDDAVKKMIKVAKKRGYVTMDELNAVLPSEEVTSEQIEDTMAMLSDMGINVVEDDEQGEEAEAAEGDAEEDANELAEQTGTAVAATTTKKEPTDRTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQAIIIWRDELNEAKILLREIIDLEATYAGPEAKQAPIVERVDEDAKPKEEPKAGRRRGGDEEDDITNVGGDNRGEEEEEDEDEASLSLAAMEAELRPQVMETLDVIADTYKKLRKLQDQQVENRLAAAGTLSPSQDRRLKELKDQLIKAVKSLSLNQARIEALVEQLYDINKRLVQNEGKLLRLAESYGVRREEFLKEYQGSELDPNWIRSISNLTSRGWKEFTKNEKDAIRDLRSEIQNLATETAISILEFRKIVNQVQKGEREAAIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQ