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cn_combo_scaffold_3170_12

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(10493..11335)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036870B0 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 280.0
  • Bit_score: 503
  • Evalue 1.70e-139
Short-chain dehydrogenase {ECO:0000313|EMBL:ESX47211.1}; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium s similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 276.0
  • Bit_score: 464
  • Evalue 1.20e-127
short-chain dehydrogenase of unknown substrate specificity similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 275.0
  • Bit_score: 449
  • Evalue 6.30e-124
  • rbh

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Taxonomy

Mesorhizobium sp. LSHC426A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
GTGAACGCGATCAAGGAGTTACGCACGGTAATCGTGACAGGTGCCTCGTCGGGCATCGGTGCCTATTGCGCGCGGGCGCTGAAGGCCGAGGGCTGGCGCGTCTTTGCCACCGCGCGCAAGCCGGAGGACCTGGCTTCGCTGGAGGCGGACGGGCTCGAGGCGCTCTATCTCGACTACACCGAGCCGCAGTCGATCGAAGCGCTGGTGGCCACCGTGCTCGAGCGCACCGGCGGCAGGCTGGACGCCCTCTTCAACAACGGCGCCCACGCGCAGGCCGGAGCGGTCGAGGACCTGCCGATGGCTGCGCTGCGCGACCAGTTCGAGGCGAACTTCTTCGGCTGGCACGACCTCACCCGGCGCATCGTGCCGGTGATGCGCCGCCAGGGCAGCGGCCGCATCGTCAACTGCTCGTCGATCCTCGGCCTGACGCCGGTGAAGTTCCGGGGCGCCTATGCCTCCTCCAAGCACGCACTCGAGGGCCTGATGCTGTGCATGCGCCAGGAACTGGACGGCTCGGGCGTGCATGTGTCCATGATCGAACCAGGACCGATCGCCTCCAAAATCGCCTCCAACGGGCTGCCCTGGTTCCAACGTTATATCGACCATGAGAACTCGGTGCATCACGAGGCTTATCAGGCCCAGTTGGCGCGGCTGAGTGGCGGCGGCAGCAAGTCATCGCTGAAGCTCGGGCCGGAGGCGGTGCATGCGGTTTTGCGCCACGCCCTGCTGTCGCCACGCCCGCGGCCGCATTATGTTGTCACGACCCCGGCGAGAATCGGTGTCGTGCTGAAGCGGATATTGCCCGCCTCTCTGCTCTACAGACTTCTGGCCCGGCAGGCCTGA
PROTEIN sequence
Length: 281
VNAIKELRTVIVTGASSGIGAYCARALKAEGWRVFATARKPEDLASLEADGLEALYLDYTEPQSIEALVATVLERTGGRLDALFNNGAHAQAGAVEDLPMAALRDQFEANFFGWHDLTRRIVPVMRRQGSGRIVNCSSILGLTPVKFRGAYASSKHALEGLMLCMRQELDGSGVHVSMIEPGPIASKIASNGLPWFQRYIDHENSVHHEAYQAQLARLSGGGSKSSLKLGPEAVHAVLRHALLSPRPRPHYVVTTPARIGVVLKRILPASLLYRLLARQA*