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cn_combo_scaffold_3229_9

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(7403..9778)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003766724 similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 793.0
  • Bit_score: 1296
  • Evalue 0.0
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllo similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 796.0
  • Bit_score: 1177
  • Evalue 0.0
organic solvent tolerance protein similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 804.0
  • Bit_score: 1132
  • Evalue 0.0

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2376
TTGAGGGGCGCACTGGCCAGCCGCATGACGGCCCACCGGGCACGTTTGTTCGGCGCGACCGCGCTTGCAAGCCTTGCCGCTTGCGCGCTTCCTGCTGTACCTGCCTTCGCGCAGACTGTCGCCGATCTGGCGCCTGAGGTCCCCGAGGGATCGCAGATGCTGCTGGAGGCGGACACGCTCGTCTATGACAACGACGCCCAGACGGTGACCGCCGTCGGCGGCGTCCAGATCGACTACGCCGGCAACCGACTCGTCGCGCAGCGCGTCACCTACGACCGCAAGACCTCCCGACTGATCGCCAGCGGCAACGTCCAGATCGTCAATTCGGACGGCACCAAGGTCTTTTCGCAAGAGATCGACGTCACCGATGACTTCGCCGATGGCTTCGTCAACACGCTCCGCGTCGAGACCGTCGACAAGACCTATTTCGCCGCCGAAAGCGCCAAGCGCGAAGGCGGCTTCCTGACGACGTTCAACAACGGCGTCTACACTGCCTGCGCGCCTTGCGAGGCGAAGCCCGACAAGGCCCCGATCTGGCGCATCAAGGCGCAGAAGATCATCTGGAACGGCAAGCAGAAGACGGTGCGCTTCGAAAACTCGAACTTCGAGTTCTTCGGCTTCCCGATCGCCTTCCTGCCGGCATTCGAGATCGCCGACCCGACGGTGAAGCGCAAGAGCGGCTTCCTGATCCCGAGCATCAGCCTCAACAGCGATCTCGGCGTCGGCGTCTCGGTTCCGTACTACTTCGCGCTCGACCCGACCTATGACCTGACGGTCACGGGAACCGGCTACACCAAGCAGGGCTTCCTGGGCGAGGCCGAGTGGCGGCAGCGCTTCAACAACGGCCAGTACAGCCTGAAGATCGCCGGCATCAGCCAGATGGACCCCGAGCAGTTCGACCCCAATACGGTCAACCGGGGCCCTACCGGCGACGAGAACAAGCTGCGCGGAATGGTCGGCTCCAAGGGCCGCTTCGACATCAATCCGCGCTGGGCATTCGGCTGGGACGTCATGCTCCAGTCAGACAAGAACTTCTCGCGCACCTATGGCATCGAGGGCTTCTCGGACAGCACGCACCGTTCCGAAGTCTACCTGACGGGCCTCAACGACCGGAATTACTTCGACCTGCGCGCCATGCGCTTCGAAGTCCAGGAGGATACCCTCGATTCCGATCCCGACTCCAAGTCGGAAAAGCAGCCTTGGGTGCTGCCGTCACTGGACTACGCCTATATCCCCGACGTCCCTCTGGCGGGCGGCGAGTTGTCGTTCGACGTCAACGCCCGCATGAACCAGCGCTCGGAGCAAGACTGGGTGCCGAGTTCGCCTGCGGTTCGCGGCATAGAGGGTTCGTCGGGACGCCTGACGGCCGAGGCCGAGTGGAAGCGTACGCTCATCACCGATGCCGGTCTGCTGGTCACCCCGTTGCTGGCCTTCCGGGCCGACGGCAGCTACCTCAACGCCTCCAACGCTTCGCTGGACGCGATCAACGACATGGCCACAGATCTGAGCGTGGCCGACGACGTGCGTTCGTCCCTGTTCCGCTACATGGCCACACTCGGCCTCGAACTGCGCTGGCCGGTGTTGTTCTCCTCGACGAGTTCGACCCATGTGCTGGAGCCGATGGCGCAGCTCTTCGCGCGGCCGAACGAGTCGTATGTCGGCGGGCTCGGGATTCCCAACGAGGACGCGCAGAGCTTCGTCTTCGACGCAGCGTCGCTGTTCGAGCGCGACAAGTTCTCCGGCTACGACCGGATGGAGGGCGGCACCCGCGCCAATCTCGGCTTCCGTTACTCAGGCAGCTACGGCAACGGCTGGACGACCAACGCGCTCTTCGGCCAATCCTACCAACTCGCCGGCGAAAACTCGTTCGCTCAGCCCGACCTCGTCAACGTCGGCGCATCTTCCGGCCTCGAGACCGACACGTCCGACTATGTGGCTCTCGCCGGCATAGCCAGCCCGAACGGCTTCTCGGCCTCGGTAAGCGGACGCTTCGACGAGCAGACGCTGGAGGTCCGCCGCACGGAGGTCAAGGCCGGGCTCGACATCGGCCAGTTCGCGATCTCGACCAAATATGCCTTCGTGGACGATCAGCCATTGTACGGCTTCGACACCGAGCGCCATGAAGTGAGCCTGGGAGCCACTGCGCGGCTGAACAGCGAGTGGCGCGTGTTCGGTTCCGGCACCTACGACATCGAGTCGGACGTGCTGGTGAACAGCGGCTTCGGCTTCGCCTATGACGACGAGTGCTTCAGCTACATGATGACCTATGCCGAGAGCCGGGAGTTGAACGATCCGGACGACGTCAACCGGACGGTAGGCTTCAACATTTCGTTCCGCACACTTGGTGATTTCGGGTCGAATACGAGCGCCTTCTGA
PROTEIN sequence
Length: 792
LRGALASRMTAHRARLFGATALASLAACALPAVPAFAQTVADLAPEVPEGSQMLLEADTLVYDNDAQTVTAVGGVQIDYAGNRLVAQRVTYDRKTSRLIASGNVQIVNSDGTKVFSQEIDVTDDFADGFVNTLRVETVDKTYFAAESAKREGGFLTTFNNGVYTACAPCEAKPDKAPIWRIKAQKIIWNGKQKTVRFENSNFEFFGFPIAFLPAFEIADPTVKRKSGFLIPSISLNSDLGVGVSVPYYFALDPTYDLTVTGTGYTKQGFLGEAEWRQRFNNGQYSLKIAGISQMDPEQFDPNTVNRGPTGDENKLRGMVGSKGRFDINPRWAFGWDVMLQSDKNFSRTYGIEGFSDSTHRSEVYLTGLNDRNYFDLRAMRFEVQEDTLDSDPDSKSEKQPWVLPSLDYAYIPDVPLAGGELSFDVNARMNQRSEQDWVPSSPAVRGIEGSSGRLTAEAEWKRTLITDAGLLVTPLLAFRADGSYLNASNASLDAINDMATDLSVADDVRSSLFRYMATLGLELRWPVLFSSTSSTHVLEPMAQLFARPNESYVGGLGIPNEDAQSFVFDAASLFERDKFSGYDRMEGGTRANLGFRYSGSYGNGWTTNALFGQSYQLAGENSFAQPDLVNVGASSGLETDTSDYVALAGIASPNGFSASVSGRFDEQTLEVRRTEVKAGLDIGQFAISTKYAFVDDQPLYGFDTERHEVSLGATARLNSEWRVFGSGTYDIESDVLVNSGFGFAYDDECFSYMMTYAESRELNDPDDVNRTVGFNISFRTLGDFGSNTSAF*