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cn_combo_scaffold_3281_13

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 9215..10360

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003649808 similarity UNIREF
DB: UNIREF100
  • Identity: 75.9
  • Coverage: 377.0
  • Bit_score: 549
  • Evalue 2.10e-153
hemolysin secretion protein D similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 381.0
  • Bit_score: 490
  • Evalue 3.30e-136
  • rbh
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJC75862.1}; Flags: Precursor;; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/A similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 381.0
  • Bit_score: 490
  • Evalue 1.70e-135

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Taxonomy

Rhizobium leguminosarum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1146
ATGTTCTCGTTCAACAGTCTCAATGCGAACGTGCGTCCAATTTTCAGCCTCGCGCTGGTATCGCTGATCGGTGCCGGGCTCGCTGCCTGCACCGAGGCGAAGACCGAGACGGTCGAGGCCGTTCGTCCCGTCAAGGTGGTCGAGATCGCCAAGGCCGACACGACGCGCGAGCTGCATTATTCGGGAGCGGTGAAGGCGCGCACCGAGATGAATCTCGGCTTCCGTGTCGGCGGCAAGATCACCGAGCGCGTCGCCAATATCGGCGACCGGGTGAAGCCGGGCGATCTGCTCGCGCGCATCGACCCGACCGACTACCAGCTGGCTGTTGCCAGTGCCGAGGCCAATTTGGCCGCCGCCGAGAAGCAGGTCGAGACGGCACGCCTCACCGACCAGCGCGCCGAGCAGCTCTACTCGAGGAAGTTCGCCTCCGAGGCCCAGCGCGAGCAGGCCGCCCTGGCCTACAAGCAGGCGGCGTCGCTGCGCGACGCAGCATTGTCCTCGCTCCGGCAGGCGAAGAACCAGGTCGGCTATGCCGAGCTGCGTTCCGACCAGAGCGGCATCGTGACCTCGATCAATGCCGACACCGGCCAGGTGGTCGGCACCGGCACCCCGGTGGTGGCGGTCGCGGTGGACGGCGAGAAGGAAGTTCAGATCGCTGTTCCCGAACTGGAAATCGGCAAGTTCACGACCGGCAAGCCGGTCAAGGTGCGCTTCTGGTCCGACGACCGCCTGGTTATGGACGGCAAGGTCAGGGAGGTGGCCGGCAGCGCCGATGCCCAGTCCCGCACCTTCTCGGTACGCGTCAGCCTGCCTGATGACGCGCGCGTGCTTCTCGGCATGACGGCTACCATCGAGGCGACCGTCGACAGCGGCCAGAACTTCGTCTCGATCCCGCTGAGCGCGCTCGCGCAGCAGGACGGCAAGCAGATCGTCTGGGTCGTCGACCAGGCGGACGAGACGGTGAAGGCGCGCGACATCAAGGTCGCCAACTTCGTCGACGACGGTGTCCAGGTGGTCGACGGCCTCGAGCCCGGTGATCTGGTGGTGTCTGCGGGTACGCAGTTCATGGCCGAGAAGCTGAAGGTGAAGGTGCCGCCCGCCGAGCAGCGCGCAGCCTCGAACGAAACGAACCACGCGGTTCGCTGA
PROTEIN sequence
Length: 382
MFSFNSLNANVRPIFSLALVSLIGAGLAACTEAKTETVEAVRPVKVVEIAKADTTRELHYSGAVKARTEMNLGFRVGGKITERVANIGDRVKPGDLLARIDPTDYQLAVASAEANLAAAEKQVETARLTDQRAEQLYSRKFASEAQREQAALAYKQAASLRDAALSSLRQAKNQVGYAELRSDQSGIVTSINADTGQVVGTGTPVVAVAVDGEKEVQIAVPELEIGKFTTGKPVKVRFWSDDRLVMDGKVREVAGSADAQSRTFSVRVSLPDDARVLLGMTATIEATVDSGQNFVSIPLSALAQQDGKQIVWVVDQADETVKARDIKVANFVDDGVQVVDGLEPGDLVVSAGTQFMAEKLKVKVPPAEQRAASNETNHAVR*