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cn_combo_scaffold_3281_18

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 16063..16542

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037A755D similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 154.0
  • Bit_score: 264
  • Evalue 7.50e-68
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.8
  • Coverage: 153.0
  • Bit_score: 232
  • Evalue 8.90e-59
Uncharacterized HTH-type transcriptional regulator y4tD {ECO:0000313|EMBL:CDX62315.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 154.0
  • Bit_score: 232
  • Evalue 3.40e-58

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 480
TTGACCAGGCAGGCGCAGCCCGAACTCGACGTTTTCGATCTCGGGATCCTCGGCATACTGCAGCGGGACAACGCCACGCCGCAGCGCGAGATCGGCGAGGCGGTGAACCTGTCGGCGCCGGCGGTGCAGCGGCGCATCAAGCGTATGGAGGAAGCCGGCGTGATCGCCGCCAATGTCGCGGTCGTCGACCCCGACAAGGCCGGGCGGCCGATCACCATCATCGTCGAGATCGCGGTGGAGAGCGAACGGGTCGACCTGCTCGACGCTGTCAAGGCGAGCTTCACCACCGCGCCCGAAGTGCAGCAGTGCTACTACGTCACCGGCGAGGCCGACTTCGTGCTGGTCGTGACGGTCGCTTCGATGGGCGAATACGAAGCTCTGACCCGGCGACTTTTCTTCGCCAATCCCAACATTAGGCGTTTTCGCACGCTGGTGGCGATGGACCGGGTAAAGGTCGGGCTGACGGTTCCGCTGGGATAG
PROTEIN sequence
Length: 160
LTRQAQPELDVFDLGILGILQRDNATPQREIGEAVNLSAPAVQRRIKRMEEAGVIAANVAVVDPDKAGRPITIIVEIAVESERVDLLDAVKASFTTAPEVQQCYYVTGEADFVLVVTVASMGEYEALTRRLFFANPNIRRFRTLVAMDRVKVGLTVPLG*