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cn_combo_scaffold_3282_19

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(13010..13426)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E0EE0 similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 142.0
  • Bit_score: 226
  • Evalue 1.50e-56
HxlR family transcriptional regulator {ECO:0000313|EMBL:EZQ15366.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseu similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 137.0
  • Bit_score: 200
  • Evalue 2.10e-48
hxlR-like helix-turn-helix family protein similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 138.0
  • Bit_score: 189
  • Evalue 7.50e-46

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Taxonomy

Pseudomonas bauzanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGAACGCGCCTGCCAAGCCCGACGTGACCAACCCCGCGGCTCCGCTGCTGCAGGCGACACCCGGATTTGAAAGCGACGGGCGCTCCTGTCCGATCCGCGATGTGCTCGACCGTGTCGGCGACACGTGGAGCCTGATGGTCATCATGAACCTTCAGGAGCGGCCGGTGCGCTTCAACGCGCTGAAGCGCACGATCGAAGGCATTTCCCAGCGCATGCTCACAGTGACGCTGCGCTCGCTCGAGCGCGACGGGCTGGTGCGCCGCACCGTGCGGCCGACGACGCCGCCGGAGGTGGAGTACGGGCTTACCGAGCTCGGACAGTCGATCGCGGTGCCCATCGGCGCGCTCGGCAGCTGGGCGGCCACAAATCGCGACCAGATGCGCTGCGCCCGCGATGCGTTCGACGCCACTGCCTGA
PROTEIN sequence
Length: 139
MNAPAKPDVTNPAAPLLQATPGFESDGRSCPIRDVLDRVGDTWSLMVIMNLQERPVRFNALKRTIEGISQRMLTVTLRSLERDGLVRRTVRPTTPPEVEYGLTELGQSIAVPIGALGSWAATNRDQMRCARDAFDATA*