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cn_combo_scaffold_4169_2

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(859..1617)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368B97B similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 251.0
  • Bit_score: 399
  • Evalue 2.40e-108
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EDT06778.1}; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Bur similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 251.0
  • Bit_score: 273
  • Evalue 2.80e-70
DeoR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.6
  • Coverage: 251.0
  • Bit_score: 271
  • Evalue 2.70e-70

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Taxonomy

Burkholderia graminis → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
GTGCTCACCAGCCAACGCAGACATCTGATCCTCGACCGGCTCGCCAGGGACGGGCAGGTCATCGCCAAAAAGCTCAGCCATGAGCTCGATCTCTCCGAGGACACCATCAGGCGCGACCTCAGGGAACTCGCGGCGGAGGGCTTGCTGCTGCGGGTGCATGGCGGGGCGATGCCGATCTCGCCGACGGCGGTTCCGATCAATGAGCGTCGCGCGATTGCGCTGGGCGCCAAGGCGGCACTCGGCAGGGCCGGCGCGACCTTGATCCGCGACGGCATGACAGTGGTGTTCGATGGCGGGACGTCGAACCTGGAGATCATCCGGCATCTGCCGGCCGGGATCCGCTTCACTGCCATCACCCATAGCCCCTCGATCGCTGTGGCGCTGGAGGAAATGGCTCAGGTCGAGGTCATGGTCATCGGCGGCAGGCTGTTCCGGCACTCGATGGTGACGGTCGGCGCGATTGCCGCTGAGGCGATCTCCCGCGTTCGCGCGGATCTCTTTTTCTTGGGCGTCACAGGCGCGCATCCCGTCTCTGGTTTGACCACGGGCGACATGGAGGAGGCGGCGATCAAGCGGCAGTTCATTACCAGCTCGGCCGAAACCGCTGTGCTGGCCACCAGCGACAAGCTTGGCGCGGTATCGCCCTTCCTGGTCGGCGCGCTCGGCGACATTGCGACGCTGGTCGTCGAGGGAAATGTTGCCGACGATCGTATCGCGGCCTTCGCCGGCAGCGGTGTTTCCGTCATGCGTGCCGGATAG
PROTEIN sequence
Length: 253
VLTSQRRHLILDRLARDGQVIAKKLSHELDLSEDTIRRDLRELAAEGLLLRVHGGAMPISPTAVPINERRAIALGAKAALGRAGATLIRDGMTVVFDGGTSNLEIIRHLPAGIRFTAITHSPSIAVALEEMAQVEVMVIGGRLFRHSMVTVGAIAAEAISRVRADLFFLGVTGAHPVSGLTTGDMEEAAIKRQFITSSAETAVLATSDKLGAVSPFLVGALGDIATLVVEGNVADDRIAAFAGSGVSVMRAG*