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cn_combo_scaffold_4733_5

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1686..2297)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L25 n=1 Tax=Hoeflea sp. 108 RepID=UPI0003651BB2 similarity UNIREF
DB: UNIREF100
  • Identity: 95.5
  • Coverage: 202.0
  • Bit_score: 388
  • Evalue 5.80e-105
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=1505946 s similarity UNIPROT
DB: UniProtKB
  • Identity: 86.1
  • Coverage: 202.0
  • Bit_score: 352
  • Evalue 2.90e-94
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 202.0
  • Bit_score: 348
  • Evalue 1.10e-93

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGAGCGAAACATACGAGCTCAAGGCCGAAGCACGCGAACTGGTCGGTAAGGGGTCCGCCCGTGAAGTTCGCCGCAACGGCAAAGTGCCTGCAGTCATTTACGGCGACAAGCAGCCTCCCCTGGCCATCGCCCTGTCCTACAAGGACATCTTCTACAAGATCCATGGCGGCGGCTTCCTGACCACCGTGGCGACGATCGACGTCGATGGCAAGAAGATCAAGGTCCTGCCGAAGGACTACCAGCTTGATCCGGTCCGCGACTTCCCGATGCACGTCGACTTCCTGCGCGTCGGCGCAAACACCGAAGTCAACGTCCAGGTCCCGGTTCACTTCATCAACGAAGAGAAGTCGGCCGGCCTCAAGCGCGGCGGCACGCTGAACATCGTCCGTCACGAGGTCGAGTTCCACTGCCCGGCCAACGCGATTCCCGAGTTCATCACCGTCGACCTCGACGGCACCGACATCGGCGACTCGATCCACATCTCCGCCGTCAAGCTGCCCAAGGGTGTGAAGCCCGTCATCTCCGACCGCGACTTCACCATCGCGACGATCGCCGGCACGTCGGCTTCGAAATCGGAAGACACGGCTGCCGAGGCTGCTGCCTCCGAGTAA
PROTEIN sequence
Length: 204
MSETYELKAEARELVGKGSAREVRRNGKVPAVIYGDKQPPLAIALSYKDIFYKIHGGGFLTTVATIDVDGKKIKVLPKDYQLDPVRDFPMHVDFLRVGANTEVNVQVPVHFINEEKSAGLKRGGTLNIVRHEVEFHCPANAIPEFITVDLDGTDIGDSIHISAVKLPKGVKPVISDRDFTIATIAGTSASKSEDTAAEAAASE*