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cn_combo_scaffold_5822_2

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(332..1120)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036C694A similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 262.0
  • Bit_score: 462
  • Evalue 2.40e-127
GntR family transcriptional regulator {ECO:0000313|EMBL:CDX38052.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mes similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 256.0
  • Bit_score: 403
  • Evalue 1.80e-109
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 261.0
  • Bit_score: 397
  • Evalue 3.50e-108

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Taxonomy

Mesorhizobium sp. SOD10 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGGATGAGGCCGCCGAGCGTATCTTCGAAACGCTGCGCGAGGGCGGCCAGAGCGGAGCCCCGCTCTACCTGCAGCTCAAGCGCAACATCGAGGATGCGATCCGCCGCGGCCTGATCGGCCCGGGCGACGCCCTCCCGTCCGAGCGCGATATCGCCGCCAAGGCCGACATATCGCGCGTGACCGTGCGCAAGGCGGTCCAGGACCTGGTCAAGAGCGGCATGCTGGTACAGCGGCACGGCTCGGGCACCTTCGTCGCCCCGCGCATGGAGCGCGTCGAGCAGTCGCTGTCGCGGCTGACCTCGTTCACCGAAGACATGGCGCGGCGTGGCATGACAGCACGCTCGCAATGGCTCGACCGTGGCATCTACACCGCGTCGCCCGACGAGATGATGGTGCTCGGCCTGTCGGCCAGCGAACTGGTGTCGCGGCTCAGCCGCCTGCGCATCGCCGACGAGACGCCGCTCGCCATCGAGCGCGCGGCAATCTCGGCTTCCGTGCTGCCGGACCCTCGCGAAGTCACATCGTCGCTCTATATGGCACTTGGCAAGACCGGCCATCGCCCGGTGCGCGCCGTGCAGCGCATTTCGGCCGTCAATCTGGGCGAGGCGGACGCAAAACTGCTCGATGTACCTGCGGGCTCGGCATGCCTGCAGATCGAGCGTATATCCTACCTCGCCACCGGCAAGGTGATCGAGTTCACCAAGTCGGTCTATAGGGGCGACGCCTACGATTTCGTCGCCGAACTGAGACTGCCCGGGGCGGATGGGCAAGAAGGAGAAAGTACTTGA
PROTEIN sequence
Length: 263
MDEAAERIFETLREGGQSGAPLYLQLKRNIEDAIRRGLIGPGDALPSERDIAAKADISRVTVRKAVQDLVKSGMLVQRHGSGTFVAPRMERVEQSLSRLTSFTEDMARRGMTARSQWLDRGIYTASPDEMMVLGLSASELVSRLSRLRIADETPLAIERAAISASVLPDPREVTSSLYMALGKTGHRPVRAVQRISAVNLGEADAKLLDVPAGSACLQIERISYLATGKVIEFTKSVYRGDAYDFVAELRLPGADGQEGEST*