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cn_combo_scaffold_10960_3

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(1460..2407)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043051}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043054};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 315.0
  • Bit_score: 540
  • Evalue 1.50e-150
tRNA pseudouridine synthase B n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BB74C similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 315.0
  • Bit_score: 601
  • Evalue 5.10e-169
truB; tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 325.0
  • Bit_score: 535
  • Evalue 7.50e-150

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGTCGCGTCGCGGCAAGAAGAAAGGCCGGCCCGTCTCCGGATGGCTGGTGCTGGATAAACCTGTGGGCATGGGCTCGACCGAGGCCGTGTCGAAGATCAAGTGGCTGTTCAACGCCGAGAAGGCCGGCCATGCCGGCACGCTCGACCCGCTCGCCTCCGGCATGCTGCCGATCGCGCTGGGTGAGGCGACGAAGACCGTTCCCTACGTGATGGACGGCGCCAAGGTGTATCGCTTCACCGTCGCCTGGGGCGAGGAGCGCTCGACCGACGACCTCGAGGGCCCGGTGACCAAGAGTTCGGACAAGCGTCCCGCCGAGGCCGACATCCGCGCCATCATGCCGAAATACACCGGCGTCATCATGCAGACGCCGCCGCAGTTCTCCGCCATCAAGATCGCTGGCGAGCGCGCCTATGACCTCGCCCGCGAGGGCGAAACCGTCGACATTCCGGCGCGTGAGATCGAGATCGGACGCCTCGACATCGTCGAGAACAGCGCCGACCGCACCGTCTTCGAGATCGAATGCGGCAAGGGCACCTATGTGCGCTCGCTTGCCCGCGACATGGGTCGTGACCTCGGCTGCTACGGCCACATCTCGGAGTTGCGCCGCGTCGGGGTCGAGCCGTTCACCGCCGAGGATTTCGTCACCATCACCGAACTGGAGCAGGCTCGCGCCGCGGGCCAGCCGGATGGCGAGGAGGGGCGCTGGGACTTCACGGCCATCGACGAATTCGTCGTCGATACCTCGGCCGCGCTCGATTGCCTGCCTCAGGTCAACGTCACCGACGAGGCCGCGACCAAGATCAGGCTCGGCAATCCGGTGATCGTCCGCGGCCGCGACGCGCCGCTCGAGGCTGACGAGGCCTGCGCCCTGTCGCGCGGCAAGCTGGTCGCCATCGGCGCCATCGAGCAAGGCATGTTCAAGCCCAAGCGCGTCTTTACCGCCTGA
PROTEIN sequence
Length: 316
MSRRGKKKGRPVSGWLVLDKPVGMGSTEAVSKIKWLFNAEKAGHAGTLDPLASGMLPIALGEATKTVPYVMDGAKVYRFTVAWGEERSTDDLEGPVTKSSDKRPAEADIRAIMPKYTGVIMQTPPQFSAIKIAGERAYDLAREGETVDIPAREIEIGRLDIVENSADRTVFEIECGKGTYVRSLARDMGRDLGCYGHISELRRVGVEPFTAEDFVTITELEQARAAGQPDGEEGRWDFTAIDEFVVDTSAALDCLPQVNVTDEAATKIRLGNPVIVRGRDAPLEADEACALSRGKLVAIGAIEQGMFKPKRVFTA*