ggKbase home page

cn_combo_scaffold_16827_8

Organism: CN-SCN_Mesorhizobium_20x

partial RP 41 / 55 MC: 4 BSCG 38 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 5062..5760

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B81DB similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 232.0
  • Bit_score: 431
  • Evalue 6.80e-118
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobiu similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 232.0
  • Bit_score: 408
  • Evalue 6.60e-111
50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 232.0
  • Bit_score: 405
  • Evalue 1.10e-110

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNJC399B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCTAAGATTGCAAAGCGCGTTTCCAAGTCCCGCGAGGGCATCGACCCGAACCAGGCTTACGGCCTCAGCGAGGCTCTCGAGCTGCTGAAGGCTCGTTCGTCGGTCAAGTTCGACGAGACCATCGAAGTCGCCATGAACCTCGGCGTCGACCCGCGCCACGCCGACCAGATGGTCCGCGGCGTGGTCAACCTGCCGAACGGCACCGGCCGTACCGTCCGCGTCGCCGTGTTCGCCAAGGACGCCAAGGCTGACGAGGCTCGCGCCGCCGGCGCCGACATCGTCGGTGCGGAAGACCTGGTCGAGATCGTCCAGAAGGGCCAGATCGACTTCGATCGCTGCATCGCCACCCCGGACATGATGCCGCTGGTCGGCCGTCTCGGTAAGGTGCTCGGCCCGCGCGGCATGATGCCGAACCCGAAGGTCGGCACCGTGACCACCGACGTCGCGGCAGCCGTCAAGGCTTCGAAGGGCGGCGCCGTCGAGTTCCGCGTCGAGAAGGCCGGCATCATCCACGCCGGCGTCGGCAAGGTGTCGTTCGACGTCAAGGCGCTGGAAGAGAACGTCCGCGCCTTCACTGATGCGGTCAACAAGGCCAAGCCGACGGGCGCCAAGGGCGTGTTCGTCAAGAAGGTCTCGGTCAGCTCGACCATGGGCCCGGGCCTCAAGCTCGACCTCACCTCGCTGGCTTCGGCCTGA
PROTEIN sequence
Length: 233
MAKIAKRVSKSREGIDPNQAYGLSEALELLKARSSVKFDETIEVAMNLGVDPRHADQMVRGVVNLPNGTGRTVRVAVFAKDAKADEARAAGADIVGAEDLVEIVQKGQIDFDRCIATPDMMPLVGRLGKVLGPRGMMPNPKVGTVTTDVAAAVKASKGGAVEFRVEKAGIIHAGVGKVSFDVKALEENVRAFTDAVNKAKPTGAKGVFVKKVSVSSTMGPGLKLDLTSLASA*