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cn_combo_scaffold_854_15

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 17366..18508

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GCU9_CHLAD similarity UNIREF
DB: UNIREF100
  • Identity: 41.6
  • Coverage: 394.0
  • Bit_score: 267
  • Evalue 1.60e-68
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 41.6
  • Coverage: 394.0
  • Bit_score: 267
  • Evalue 4.60e-69
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=326427 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 41.6
  • Coverage: 394.0
  • Bit_score: 267
  • Evalue 2.30e-68

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Taxonomy

Chloroflexus aggregans → Chloroflexus → Chloroflexales → Chloroflexia → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 1143
GTGGGGGCAACACCGGTCGACGAATGCGTGGAGGATGCCGTCGCCGACCGCGAACGACAAGGCTTCCTGCACCTGTCCGATCTGCAGCGCCTCATCGACCAGCACCGGCTCGACGGGCAGCAGACCGCCGCCGTTTTCACCGCGCTGCGGGGCCTCGGCGTGCTCGTCGTCGACAACAACCAAGACGACCTGCCCGCAGCCGTCGCGCCCGCCGAGGCACGCGCCGGACGGGACACCGTCGGCCTGATGCTGCGATCGGCAGGACGGATGAAGCTGCTCACCGCGGACGAGGAAGTCTTGCTGGGCCGGCGGATCAGCATCGGACAGCGGATCCTCGCCGCCGACCCGCAACCCGCCCCGGGGAGCGACGAAGCTCGTCAGGTCGAAGACGGCCGCCGCGCCCACGATCAGCTGGTGCTCGCCAACTTGCGCCTGGTGGTATCCATCGCCCGCCGCTACCGGCCGCACGGTATGGACCTGGCCGACCTCATCCAGGAGGGCACCCTCGGACTGATGCGCGCGGCTGACAAGTTCGACCACACCCTCGGCTACAAGTTCTCTACTTACGCGACGTGGTGGATCCGGCAGGCGATCCAGCGGGGGCTGGCCGACCGGGGCCGGCTGGTCCGGCTGCCGGTGCATGTCACCGAGAAGCTGGTCCGCGTCACCGCGGTCCGTGAACGGCTGCAGGCCGCCCTGGACCGCGACCCCACCCCGGAGGAGATCGCCGCCGACCTCGGCATGGACCCCGGCGACGTGCGAGGACTGCTCGACGCCGGCCGGGAACCGGTCAGCATCGACCAGCGAATCGGGGAAGACGAGGACACGGACCTCGGCGATCTGCTGAACCTATACGCCGAGGATGTCGCCGACGAAGTGGTCCGCACCATCATCCGCGCCCAGATCCGCCACGTTCTGGATGAGATCGACAAGGCGCAGACCGCGTCCGCCAAAGGCGCCGCCGCTCATGCTGTGCAGATGCTGAAGCTGCGATACGGGTTAGACGACGACCGCGAACGTACCCTCGAGGAGATTGGCGACGCGTTCGGGGTTACCCGGGAACGGGCACGCCAGATCCTCAACAAGATTCTTGCCTCGCCCCGGCTGCGCGCCGCGCTCAGCCCGCTGACCGACACAGAATGA
PROTEIN sequence
Length: 381
VGATPVDECVEDAVADRERQGFLHLSDLQRLIDQHRLDGQQTAAVFTALRGLGVLVVDNNQDDLPAAVAPAEARAGRDTVGLMLRSAGRMKLLTADEEVLLGRRISIGQRILAADPQPAPGSDEARQVEDGRRAHDQLVLANLRLVVSIARRYRPHGMDLADLIQEGTLGLMRAADKFDHTLGYKFSTYATWWIRQAIQRGLADRGRLVRLPVHVTEKLVRVTAVRERLQAALDRDPTPEEIAADLGMDPGDVRGLLDAGREPVSIDQRIGEDEDTDLGDLLNLYAEDVADEVVRTIIRAQIRHVLDEIDKAQTASAKGAAAHAVQMLKLRYGLDDDRERTLEEIGDAFGVTRERARQILNKILASPRLRAALSPLTDTE*