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cn_combo_scaffold_1872_27

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 28423..29805

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YWT1_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 420.0
  • Bit_score: 264
  • Evalue 1.70e-67
Spermidine/putrescine ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAD35013.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mi similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 420.0
  • Bit_score: 264
  • Evalue 2.30e-67
sugar ABC transporter ATPase similarity KEGG
DB: KEGG
  • Identity: 38.9
  • Coverage: 378.0
  • Bit_score: 224
  • Evalue 7.00e-56

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
GTGATCCACGCGCTGGGGGCGAGGATCGGACTCGATCTGGGCGCGCTCGATCCTTCGCAACGCGCGGTGGTCCTCAAGACCTGGTGCGCCGCCGTGGGCCAAGGGCAGGCGGCCGACGTGGTCGTGACGGTGCCCGCGCAGCCCGACACCGTGCGGCTCCTCGCCCGTCTGTCGCAGAGCGTGACGCGGGAAGCGATCGAGTGTCGCCGGGGTGAGGGCTGGATGCTGCACGCCGCCGCCGTCGCCGACGACACGGGTGCCGTCGTCGTCCTGGTGGGGTTGTCCGGTGCCGGCAAGACGACGGCCGCTCGCGTTCTCGGACGCGAGTTCGCCTATCTCACCGACGAAACCGTGTTCCTCGCACGGGACGGCGCGGTGCTTCCCTATCGGAAGCCGCTTTCGGTGATCGAGTCGCGGCGCGGTCCGAAAAGCGAGCGCGCGCCGGAGACGCTCGGACTCGATCGTCCCGTCCCCGAGCGGCTCCACGTCGCTGCCATCGTGCTTCTGGATCGGCGGGCGGACGCCGAGGATGAGGCATCCGTCTCCGTCGTCGATCTCGGCGACGCGCTTCCCGAGCTCGTCATGCAGTCGAACTATCTCGGTGAGATGCGCGCGCCGCTCCGGACGATCGGGCACCATGCGCAGGCGGTCGGCGGGGTGCGCCGTGTCCGTTACCGTGAGGCGTCTCAGCTCGTCCCGATCGTGCGAGGGTTGCTCGATCGTCCGCGAACATCGCGACCGGCGCCGCGAGACGTCGGTGAAGACGACGCTCGCCACGCGTCGCGTTCGAGGTGGACCTCGGCGCCTCGGTACGCACGCCGTCCTGTCGACGACGTCCTCCCCTTGACAGATCCCGACCGGCTGGCCGTCCTCGCCCACGGCTCGGTCCGCGTGCTCTCCGGCATCGGCCCGGCGATCTGGCGCAACGCGGAGGGGGCTCCCCTGTCAGCGCTCGTGCAGAGTGTCGTCGCCGGCGTCGGATCCCCACCCGGAGCGTCGGCGGAGGAGATCGAGGACAGCGTCCGCGCCGCGGTGGATGCCCTTGTGAGCGAGGGGCTCCTCTCCGAGACGGCTCCGCGATGGAGGATCCGCGCCGACGTCGCGTGGACGGACGACGGGGAGACGATCACGGCCCTCCCGCTCGGTGAGTGGCGCCGAGCCGCACCCTTCGGCATCGAGGGATCCGGCGCGGTCATCTGGCGAGAGCTCGCTTCGGCGGTTGCCGCATCCGCGGACGCCGCGTCGCCGCGCGAGCTGGCCGAGGCCGTCGCGCTGCGGCTCCAGGTGGACCAGCGTGTCGCGGGCGAATGGGTGACGGCCTTCCTGGACGAGCTGGGGGCGGCCGGTCTGGTCGAAGCGGAAACAGCCCCCGTGGCGTCCTAG
PROTEIN sequence
Length: 461
VIHALGARIGLDLGALDPSQRAVVLKTWCAAVGQGQAADVVVTVPAQPDTVRLLARLSQSVTREAIECRRGEGWMLHAAAVADDTGAVVVLVGLSGAGKTTAARVLGREFAYLTDETVFLARDGAVLPYRKPLSVIESRRGPKSERAPETLGLDRPVPERLHVAAIVLLDRRADAEDEASVSVVDLGDALPELVMQSNYLGEMRAPLRTIGHHAQAVGGVRRVRYREASQLVPIVRGLLDRPRTSRPAPRDVGEDDARHASRSRWTSAPRYARRPVDDVLPLTDPDRLAVLAHGSVRVLSGIGPAIWRNAEGAPLSALVQSVVAGVGSPPGASAEEIEDSVRAAVDALVSEGLLSETAPRWRIRADVAWTDDGETITALPLGEWRRAAPFGIEGSGAVIWRELASAVAASADAASPRELAEAVALRLQVDQRVAGEWVTAFLDELGAAGLVEAETAPVAS*