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cn_combo_scaffold_2411_24

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(27027..27746)

Top 3 Functional Annotations

Value Algorithm Source
Arginine/lysine/ornithine decarboxylase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YLS8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 178.0
  • Bit_score: 226
  • Evalue 3.40e-56
Arginine/lysine/ornithine decarboxylase {ECO:0000313|EMBL:GAD33979.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. T similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 178.0
  • Bit_score: 226
  • Evalue 4.80e-56
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 202.0
  • Bit_score: 163
  • Evalue 7.70e-38

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAACAGCACCAATCGAGCCCTCAACCGCATCGTCCTGCTGATCCTCGGGATCGTCCTGGTGGGCATCGGCGGAGTCGTCGCCACCGCGGCATCCGTTCCCGTCGTCGCCGACACGTGGGCCACCTCAGCCGAGGCCGTGCAGCAGTGGGCGACCGGCGCGTGGGAGTCCACGCAGATCGCCGGCACGCAGCTGACCTGGGTGGCCGTGGCCCTCCTCGCCGCCTTCGTCCTGCTGATCGCCCTGCTGATCACGCTCGTCGTCCGGGGCGTCCGCGGCCGTCGCCAGACCGCCTTCGGCGCCACCGGCTCGAACGGCGAGGCGGGCCGGGTCACCGTGACCGAGGGGTTCGCCAGCGACCTCCTGAGAAACGCCCTCACCGAGCGCGACGAGATCCTCACCGCGAAGGTGACCGCGAGCGACGTGAAGAAGCAGCCGGTGCTGCACGTGAGCGTCACGCCGCGGCAGAACACCTCGCCGGTCGCCGTCGCCGAGACGGTCGATCAGCTGGTCACCAACCTCGCCGCCCTCAGTCATTCCGCGCCGCGCGCGGGCGATATCCGAACGGATGCCGCCCGCGCGCGGTTTTCGCGTCCCCGGTACCGTCCACGTACCTCCTGGATGCCCCCGCGTCAAGACGCAACACCGACCCGCGCAGACTGCGATCCTGAACCCGAAGCTTCCGCACCCGCACCCCTGCGCGGCCGAGGCCGAGCTTGA
PROTEIN sequence
Length: 240
MNSTNRALNRIVLLILGIVLVGIGGVVATAASVPVVADTWATSAEAVQQWATGAWESTQIAGTQLTWVAVALLAAFVLLIALLITLVVRGVRGRRQTAFGATGSNGEAGRVTVTEGFASDLLRNALTERDEILTAKVTASDVKKQPVLHVSVTPRQNTSPVAVAETVDQLVTNLAALSHSAPRAGDIRTDAARARFSRPRYRPRTSWMPPRQDATPTRADCDPEPEASAPAPLRGRGRA*