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cn_combo_scaffold_1040_10

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(10219..11271)

Top 3 Functional Annotations

Value Algorithm Source
geranylgeranyl pyrophosphate synthase n=1 Tax=Microbacterium yannicii RepID=UPI0002D9C0F5 similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 350.0
  • Bit_score: 540
  • Evalue 1.60e-150
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:KEP76006.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUB similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 348.0
  • Bit_score: 505
  • Evalue 6.00e-140
geranylgeranyl pyrophosphate synthase similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 347.0
  • Bit_score: 496
  • Evalue 5.60e-138

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
GTGACCCCCTCCGCGTCCGATTCGCGTCTCGGCAAGCTGGGCCTCACCGACCGCATCTTCGCCGGCGCCCGTTCGCGTCGGCTCCTCGCCACGGTCGATGAGGGCATGCTCCGCGTCGACGCCGCCCTCGGCGACGAGCTGCGCATGGCGCAGCCGGTCGTCGACGCCGTCAGCCGCTACCTCTACGAGGCGGGCGGCAAACGCGTGCGGCCGATGCTCGCGCTTCTCACCGCCCAGCTCGGTGACGGAACGACGGATGCCGTCGTCGAAGGCGCGGCCGCGCTCGAGCTCACCCACCTCGGCTCGCTCTACCACGATGACGTCATGGACGACGCGGACAAGCGCCGCGGCGTCCCGGCCGCGCACGAGGTGTGGGGCAACAGCGTCGCGATCCTCGCCGGCGACCTGCTCTTCGCCCGGGCGAGCCAGATCATGGCCCGGTACGGCGAGCGCGCGATCCGGATCCAGGCCGACACGTTCGAGCGTCTCGTCCTCGGTCAGATGCGTGAGACCGTCGGACCCGCCGAGGGCGACGATCCGGTGCAGTTCTCGCTCGACGTCCTGGCCGACAAGACGGGATCGCTCATCGCGGCATCCGCTCAGGTGGGAAACATCTTCGCCAACGGCCCGGAGGAGTTCGAGCAGCCGCTGGCGGTCTTCGGCGAGAAGGCGGGGGTCGCCTTCCAGCTGCTCGACGACGTGATCGACCTCGCCGCCGACCCCGCCGAGACCGGCAAGGTGCCCGGCACCGACCTGCGCGCGGGGGTCCCCACGATGCCGTACCTCGTGCTCACCCGCCGCACCGACGCGGACTCGGTGGGCCTGCGCGAAGAGATCGACGACGGCGTCGCCCGGATCGCCGCCGGCGCCGACCCCGCGATCCTCGATCACGCCCTCGCCCGTCTCCGCGATCACGAAGCCACCCAGGCCACCCGCGACCTCGCGGGCTCGTACTCGCAGGAGGCCATCGACGCCCTCGAACCGCTGCCGGACGGCGCGGTCCGCGAGGCTCTCACCCGGTTCGCGCGCGCCGTCGCCGACCGCTCCCGCTGA
PROTEIN sequence
Length: 351
VTPSASDSRLGKLGLTDRIFAGARSRRLLATVDEGMLRVDAALGDELRMAQPVVDAVSRYLYEAGGKRVRPMLALLTAQLGDGTTDAVVEGAAALELTHLGSLYHDDVMDDADKRRGVPAAHEVWGNSVAILAGDLLFARASQIMARYGERAIRIQADTFERLVLGQMRETVGPAEGDDPVQFSLDVLADKTGSLIAASAQVGNIFANGPEEFEQPLAVFGEKAGVAFQLLDDVIDLAADPAETGKVPGTDLRAGVPTMPYLVLTRRTDADSVGLREEIDDGVARIAAGADPAILDHALARLRDHEATQATRDLAGSYSQEAIDALEPLPDGAVREALTRFARAVADRSR*