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cn_combo_scaffold_1040_33

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(29690..30070)

Top 3 Functional Annotations

Value Algorithm Source
PadR family transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0003171D71 similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 111.0
  • Bit_score: 177
  • Evalue 9.60e-42
transcriptional regulator PadR family protein similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 109.0
  • Bit_score: 174
  • Evalue 1.80e-41
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:AEE45832.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 109.0
  • Bit_score: 174
  • Evalue 8.70e-41

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Taxonomy

Cellulomonas fimi → Cellulomonas → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGACCCTCGACAATATTGTGTGTCACACGGTATCGTGCATGACGTGGAAGAGACAGCGGCCCTCGAGACCCACGTGCAGGAGCTGCGGCGCGGCACCATCGTCCTCGCATGCCTCCGCCTCCTGCGCACCGACGGGTACGGGTACGGCCTGCTCGAAGACCTGCAGACCCGGGGATTCGACACCGATGCGAACACCCTCTACCCGCTCCTTCGCCGACTCGAGAAGCAGGGGCACCTGACGAGCGTCTGGAACACCGACGAGGCGCGACCGCGGAAGTTCTACCGCACCACCGCGAGCGGTGAGTGGCTGGCCGCCGCACTCACGAGAGATTTCGCGGCGATCGCATCGTCGATCGCCGCCCTACCCGAGGAGGACTGA
PROTEIN sequence
Length: 127
MDPRQYCVSHGIVHDVEETAALETHVQELRRGTIVLACLRLLRTDGYGYGLLEDLQTRGFDTDANTLYPLLRRLEKQGHLTSVWNTDEARPRKFYRTTASGEWLAAALTRDFAAIASSIAALPEED*