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cn_combo_scaffold_1534_58

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(63490..64605)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CB26C similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 371.0
  • Bit_score: 581
  • Evalue 8.50e-163
Membrane lipoprotein TmpC {ECO:0000313|EMBL:KJL23191.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.6
  • Coverage: 371.0
  • Bit_score: 582
  • Evalue 3.10e-163
ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 367.0
  • Bit_score: 400
  • Evalue 5.80e-109

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1116
TTGACCATCTCACGCACCAAGAAGCTCGTCGGTGTCACAGCCGCCGCGGGCATCGTCGCATTCCTCGCCGGCTGCGGCGCGGCCCCCGAGGCCGACACGTCCGACACCGCCGCACCCGAAGCGGCTGACGATTTCATCCCCTGCCTCATCTCGGATGAGGGCGGCTGGAACGACCGCTCCTTCAACCAGTCCGCCAAGGAGGGCATGGACCGTGCCATCGACGAGCTGGGTGTCGAGGGCATCGAGCTCGAGTCGACCACGCCGAACGACTACGGCCCCAACCTCGAGCAGCTCGTCGCCGAAGGCTGCACGCTGATCGTCTCGGTCGGCTTCAACCTCGCCGCCGCGACCGTGGAGTCGGCTCTCGCGAACCCCGAGATCAACTACGCGATCATCGACGACTACGCCGACACCGACTTCGACGGCACCACGGATGCCCCGAACATCAAGCCCCTCGTCTTCGACACCGCGCAGGCGGCCTACCTCGGCGGATACGCCGCGGCATCCTGGTCCGCCGAGAACGGCGTGAACAAGGTCGGCACCTTCGGTGGCATGCAGATCCCCTCGGTCGCGGTCTTCATGGACGGCTACGAGCTGGGCGTGCAGAAGTACAACGAGGACAACGGCGCCAACGTCGAGGTCTTCGGTTGGGACACCGCGGCCCAGGAGGGTTCGTTCACCGGCGGCTTCGCCGCGAACGACACCGCCAAGCAGACCGCACAGGGCGTGCTCGACCAGGGTGTCGACGTGATCCTGCCCGTCGGCGGACCGATCTACGTCAGCGCGGCCGCGGCCATCGCCGAGGGCGGCGGCGACGTCGTCATGCTCGGCGTGGACAGCGACCTCGCCGTCGCCGACCCGGACGTCGCCGACGTCACCCTCGTGTCGATCATGAAGGCGATCGACGTCGCCGTCTACGACGCGACCGTGGCCGCCGCCGGTGGCGACTTCGACGTCGCCCCCTACATCGGCACGCTCGAGAACGAGGGCGTCAAGCTCTCCGGCTTCGGTGCGTTCGAGTCCGAGCTGCCCGAGGGCCTCGTGGACGAGCTGATGGCGCTGCAGGAGCAGATCGTCTCCGGCGAGATCGTCGTGGAGTCCCCGAACTCCCCGTGA
PROTEIN sequence
Length: 372
LTISRTKKLVGVTAAAGIVAFLAGCGAAPEADTSDTAAPEAADDFIPCLISDEGGWNDRSFNQSAKEGMDRAIDELGVEGIELESTTPNDYGPNLEQLVAEGCTLIVSVGFNLAAATVESALANPEINYAIIDDYADTDFDGTTDAPNIKPLVFDTAQAAYLGGYAAASWSAENGVNKVGTFGGMQIPSVAVFMDGYELGVQKYNEDNGANVEVFGWDTAAQEGSFTGGFAANDTAKQTAQGVLDQGVDVILPVGGPIYVSAAAAIAEGGGDVVMLGVDSDLAVADPDVADVTLVSIMKAIDVAVYDATVAAAGGDFDVAPYIGTLENEGVKLSGFGAFESELPEGLVDELMALQEQIVSGEIVVESPNSP*