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cn_combo_scaffold_1736_31

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(29116..29763)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Microbacterium yannicii RepID=UPI0003195C84 similarity UNIREF
DB: UNIREF100
  • Identity: 88.5
  • Coverage: 217.0
  • Bit_score: 375
  • Evalue 4.10e-101
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:KHK98883.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 208.0
  • Bit_score: 359
  • Evalue 2.50e-96
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 218.0
  • Bit_score: 346
  • Evalue 7.50e-93

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 648
GTGACCGTCATACTCGAACGCGAGGACGCCGCCGTAGACTGGCGCCTGATGAGCGAACAGCCCGACCAGGCGCCCGATGCGCGCACCCAGTTCGAGGAGCAGGCGCTCCCGTTCATGGATCAGTTGTACGCCGCCGCCATGCGGATGACGCGCAACCCCGCGGACGCCGCCGACCTCGTCCAGGAGACGTTCGTCAAGGCCTTCGCGTCCTGGCAGACGTTCACGCAGGGTACGAATCTGAAGGCGTGGCTGTACCGGATCCTCACCAACACCTACATCAACATCTATCGCAAGAAGCAGCGGGAGCCGTATCAGGGCACCATCGACGAGCTGGAGGACTGGCAGCTCGGCGGAGCGGAGTCGACCACGGCGCGGGCCAGCCGGTCCGCCGAGGCGGAAGCGATCGATCACATGCCGGCATCCGTGGTGAAGGATGCCCTGCAGGCGATCCCCGAGGACTTCCGGTTGGCGGTGTACCTCGCCGACGTCGAGGGATTCGCCTACCAGGAGATCGCCGACATCATGAAAACACCGATCGGCACGGTCATGAGCCGCCTGCATCGCGGCAGGCGCATGCTGCGTGATCTGCTGGCCGACTATGCGACGGAGCGCGGCATCGCCGGTGCCGCCACGAGGAGTGCGAAATGA
PROTEIN sequence
Length: 216
VTVILEREDAAVDWRLMSEQPDQAPDARTQFEEQALPFMDQLYAAAMRMTRNPADAADLVQETFVKAFASWQTFTQGTNLKAWLYRILTNTYINIYRKKQREPYQGTIDELEDWQLGGAESTTARASRSAEAEAIDHMPASVVKDALQAIPEDFRLAVYLADVEGFAYQEIADIMKTPIGTVMSRLHRGRRMLRDLLADYATERGIAGAATRSAK*