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cn_combo_scaffold_2189_14

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(11430..12245)

Top 3 Functional Annotations

Value Algorithm Source
protocatechuate 4,5-dioxygenase subunit beta n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F4268 similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 267.0
  • Bit_score: 475
  • Evalue 4.80e-131
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KHK95059.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 271.0
  • Bit_score: 469
  • Evalue 2.80e-129
pcaH; protocatechuate 3,4-dioxygenase beta subunit similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 270.0
  • Bit_score: 453
  • Evalue 4.20e-125

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGACCGAGACCCCGTCCGCGGCCGCGCCGGAGACGCTGCTGGCGTCGCCGGACCAGGTGAGCCAGGCTGCCATCACGCAGGAGATCATCGACGCGCACGCCGCGGCGGAGCGCCGGGTGGCGGCGGGGGAGGACGTCCCCGCCACCCTCTACGACTTCCCGCCGTACCGGTCCAGCATCCTGCGGCATCCGACGAAGAACCCGAAGCTGGTCGACCCCGAGACGATCGAGCTGTTCTCGCCGGCGTTCGGGCAGCGCGACGTCGCCGCGATCGAGTCCGACCTCACCCTGCAGCACACCGGCGAGCCGCAGGGAGAGCGCATCACCGTCAGCGGCACGGTGCGCGACTCGTGGGGACGCCCGGTGCGCAACCAGCTCGTGGAGATCTGGCAGGCCAACGCCGCCGGACGCTACATCCACCAGCGCGACCAGCACCCCGCGCCGCTGGACCCGAACTTCACCGGTGCCGGACGCATCGTCACCGACGACGCCGGCGCGTACCACTTCACCACGATCAAGCCCGGCGCCTACCCGTGGAAGAACCACGTCAACGCGTGGCGGCCCGCCCACATCCACTTCTCGGTGTTCGGATCGGCGTTCACGCAGCGGATCGTCACCCAGATGTACTTCCCCGGCGACCCCCTGTTCGCGCTCGACCCGATCTACAACACCATCCGCACCCAGAAGGACCGCGATCGCCTGGTGGGCGTCTACGACCACGACCTCACCGTCCCGGAGTTCTCCATGGGGTTCCGGTTCGACATCGTCGTGGACGGTCCCGACGCGACGTGGTTCGAGAACGAGGGAGACCACTGA
PROTEIN sequence
Length: 272
MTETPSAAAPETLLASPDQVSQAAITQEIIDAHAAAERRVAAGEDVPATLYDFPPYRSSILRHPTKNPKLVDPETIELFSPAFGQRDVAAIESDLTLQHTGEPQGERITVSGTVRDSWGRPVRNQLVEIWQANAAGRYIHQRDQHPAPLDPNFTGAGRIVTDDAGAYHFTTIKPGAYPWKNHVNAWRPAHIHFSVFGSAFTQRIVTQMYFPGDPLFALDPIYNTIRTQKDRDRLVGVYDHDLTVPEFSMGFRFDIVVDGPDATWFENEGDH*