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cn_combo_scaffold_2189_27

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(24948..25094)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Microbacterium yannicii RepID=UPI000319A8AB similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 44.0
  • Bit_score: 87
  • Evalue 3.90e-15
Cold shock protein (Beta-ribbon, CspA family) {ECO:0000313|EMBL:EPD85173.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 44.0
  • Bit_score: 86
  • Evalue 9.10e-15
cold shock proteins similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 42.0
  • Bit_score: 83
  • Evalue 1.50e-14

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 147
ATGGCCACTGGCACCGTGAAATGGTTCAACTCCGAAAAGGGCTACGGCTTCATCGCTCCCGATGACGGCTCCGCCGACCTGTTCGCGCACTACAGCGCGATCACCACGTCCGGCTTCAAGGAGCTGCGCTCCCCGCCGACCGGATGA
PROTEIN sequence
Length: 49
MATGTVKWFNSEKGYGFIAPDDGSADLFAHYSAITTSGFKELRSPPTG*