ggKbase home page

cn_combo_scaffold_3545_16

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(16071..18602)

Top 3 Functional Annotations

Value Algorithm Source
Superfamily II RNA helicase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMJ3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 863.0
  • Bit_score: 1361
  • Evalue 0.0
DEAD/DEAH box helicase {ECO:0000313|EMBL:KIC59527.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 851.0
  • Bit_score: 1366
  • Evalue 0.0
superfamily II RNA helicase similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 839.0
  • Bit_score: 1280
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2532
ATGCCCGCGACCCTGACCGAGTCCCTCGCGTCGGCCGCCGGCGATGCGGATGCCGTGTACGACGTCTTCGTCGAATGGGCCACCGACCGGGGTTTCACCCTCTATCCGGCCCAGGACGAGGCCGTCATCGAGCTGGTCTCGGGCGCGCACGTGATCCTGTCCACCCCGACCGGCACCGGCAAGTCGCTCGTCGCCGTCGCGGCGCACGCCGCCTCGCTCGCCCGAGGCGGCCGCACGTACTACACGGCGCCGATCAAGGCCCTGGTGAGCGAGAAGTTCTTCGCGCTCGTGGAGATCTTCGGCGCCGACAAGGTCGGCATGGTCACGGGGGATTCCTCCGTGAACCCCGATGCGGCGATCGTCTGCTGCACGGCCGAGATCCTCGCGAACCTCGCCCTCCGACAGGGGACGGATGCCGCGATCGACCAGGTCGTCATGGACGAGTTCCACTACTACGGCGACCCCGAGCGCGGGTGGGCGTGGCAGGTGCCGCTGCTGACCCTCACCGGCACGCAGTTCCTCCTGATGTCGGCGACGCTCGGCGACGTCACCGCCATCGCGGACGATCTGCGGGAGCGCACCGGACGCCCGGTCGCGGAGGTCACCGGCGTCGAGCGCCCGGTGCCGCTGCACCACGACTACGAGCGGATGCCGGTCCACGAGGTCGTCCAGCGGCTCATGGATCAGGGCGAGACGCCGGTGTACATCGTCCACTTCTCCCAGGCGCAGGCGGTCGAGCGCGCGCAGGCCCTGTCGTCGGCGAAGGTCGCCACGCGCGAGCAGCGTGACGCCATCGCGGAGGCGATCGGCGGATTCCGCTTCACCACCGCCTTCGGCAAGACCCTGTCGCGCCTCGTCCGCGCGGGGATCGGCATCCACCACGCGGGCATGCTGCCGCGGTACCGACGCCTCGTCGAGACGCTCGCGCAGCGCGGACTCCTGCGGGTCATCTGCGGCACCGACACCCTCGGGGTGGGGATCAACGTCCCCATCCGCACAGTCGTCATCACCGCGCTGTCGAAGTACGACGGCACGCGGATGCGCCAACTCTCCGCGCGCGAGTTCCATCAGGTCGCCGGCCGTGCGGGCCGCGCCGGCTACGACCCCTACGGCAACGTCATCGTGATGGCGCCGGAGTGGGAGATCGAGAACGAGGCCGCGCTCCGGAAGGCCGGCGACGACGCCGCGAAACGGAAGAAGATCGTCCGGAAGAAGGCGCCGACAGGCGTCGTGAACTGGGGGCTGGGGTCGTTCGAGCGCCTGGTCGCGGCCACGCCCGAGCCGCTGACGCCGCACATGCAGATGACCGCGGCGATGCTGATCAACGTCATCGGTCGCGGCGGGGACGTCTTCGGCAACGTGCGCGCGCTCGTGTCCGACAACCACGAACCCCTCGCCCGCCGGTACGAGCTCGCCCGGCGCGCGCTGGCGATCTTCCGGACGCTCCGCGCCGCCGGCATCGTCGAGGTCGACCGCACGGGCCCGGAACCCGTGGTGCGCCTGACGGTCGACCTCCAGCCGAACTTCGCGCTCAACCAGCCGCTGTCGCCGTTCGCGCTCGCCGCGATCGACCTGCTCGATCGCGACAGCGGAGCACCGCAGGAGGACGGTACGGGCTCGGGCCACTACGCCCTCGACGTCGTCAGTGTCATCGAGGCGACGCTCGACGATCCGCGGGCGATCCTGTCGCAGCAGGAGTACCGCGCGCGCGGGGAAGCGGTCGCGGCGATGAAGCGCGACGGCATCGAGTACGACGAGCGCATGGCGCTCCTCGAGGAGATCACCTACCCGAAGCCGCTCGCCGACCTGCTCGCGCAGTCGTTCGAGGTCTTCGCGTCGAGCCAGCCGTGGGTCCGCGACTTCGAACTGTCGCCCAAGTCGGTGGTGCGCGACATGTTCGAGCGGGCGATGTCGTTCGGAGAGTTCGTCGCCTTCTACCAACTCGGTCGCAGCGAAGGTCTGGTCCTGCGGTACCTGTCGGACGCCTACCGCGCGATCCGACAGACGGTCCCCGCCGAGGCCCGCACCGACGACCTCATGGACGTCATCGAGTGGCTTGGCGAGCTCGTGCGTCAGGTCGACTCGAGCCTCGTCGACGAGTGGGAGTCGCTGACCCACCCCGCAGCCGAGGGCGACGACGCGCCCGTCGTTCCGCCCGCGCCTCCGTCGGTGCTCACCAACCGTCGCGCATTCACGGTCCTCGTCCGCAACGAGCTGTTCCGCCGCGTGCAGCTGGCGGCGCTGCAGGACGACGATGCGCTGGTCGCGCTCGACCCCGACGTCGACTGGCCCGCCGCCCTCGACGCCTACTTCGACGAGCACGAAGAGATCCTCACCGGCGGTCCCGCGCGTTCGCCGTCGCTCGTGCGCATCGACGAGACGGATGCCGCCGCCGGCCGGTGGGTCGTCGAGCAGACCCTCGACGACCCTGCGGGGGATCACGACTGGCGCATCCGCGGCGAGGTGGACCTCGCGGCATCCGTCGAGGAGGGCACCGCCGTGCTCCGCGTGAACGAGGTCGTCCGCCTCTGA
PROTEIN sequence
Length: 844
MPATLTESLASAAGDADAVYDVFVEWATDRGFTLYPAQDEAVIELVSGAHVILSTPTGTGKSLVAVAAHAASLARGGRTYYTAPIKALVSEKFFALVEIFGADKVGMVTGDSSVNPDAAIVCCTAEILANLALRQGTDAAIDQVVMDEFHYYGDPERGWAWQVPLLTLTGTQFLLMSATLGDVTAIADDLRERTGRPVAEVTGVERPVPLHHDYERMPVHEVVQRLMDQGETPVYIVHFSQAQAVERAQALSSAKVATREQRDAIAEAIGGFRFTTAFGKTLSRLVRAGIGIHHAGMLPRYRRLVETLAQRGLLRVICGTDTLGVGINVPIRTVVITALSKYDGTRMRQLSAREFHQVAGRAGRAGYDPYGNVIVMAPEWEIENEAALRKAGDDAAKRKKIVRKKAPTGVVNWGLGSFERLVAATPEPLTPHMQMTAAMLINVIGRGGDVFGNVRALVSDNHEPLARRYELARRALAIFRTLRAAGIVEVDRTGPEPVVRLTVDLQPNFALNQPLSPFALAAIDLLDRDSGAPQEDGTGSGHYALDVVSVIEATLDDPRAILSQQEYRARGEAVAAMKRDGIEYDERMALLEEITYPKPLADLLAQSFEVFASSQPWVRDFELSPKSVVRDMFERAMSFGEFVAFYQLGRSEGLVLRYLSDAYRAIRQTVPAEARTDDLMDVIEWLGELVRQVDSSLVDEWESLTHPAAEGDDAPVVPPAPPSVLTNRRAFTVLVRNELFRRVQLAALQDDDALVALDPDVDWPAALDAYFDEHEEILTGGPARSPSLVRIDETDAAAGRWVVEQTLDDPAGDHDWRIRGEVDLAASVEEGTAVLRVNEVVRL*