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cn_combo_scaffold_3847_10

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 11169..11873

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EDF85B similarity UNIREF
DB: UNIREF100
  • Identity: 78.9
  • Coverage: 232.0
  • Bit_score: 347
  • Evalue 9.90e-93
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 231.0
  • Bit_score: 328
  • Evalue 1.80e-87
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEG44667.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabi similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 231.0
  • Bit_score: 328
  • Evalue 8.70e-87

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Taxonomy

Isoptericola variabilis → Isoptericola → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTCGGATGCCGCGACCGCACCGTCGCAGACCCTCAGCCGCGGCATCCGGATCCTGGAGATCCTCGCCGACGCCCGCGAGTCCCTGTCGATCGACGAGGTCGCGCGGCGGCTCGCGGTGCATCGGTCGGTCGCGTACCGCCTGCTGCGCACGCTCGAAGACCACGGGCTCACCGCGCGGGATGCCGCCGGCCGGGTCGTGCTCGGCTCACGGCTCGCCGCCCTCGCCGCCGGCGTCGCGCACGATCTGCAGGCCGAAGCCCTCCCCGAACTCACCGCCGTGGCGAACGAGCTCGGGATGACGTGCTTCCTCTCGGTGCGCGACCACGACGACGCGATCACCCTTGCGAGCGTCGAGCCCCGACATGCGGTGGCCTCCGTCGCGCAACGCCCCGGCACGCGGCATCCCGTCACGGTCGGCGCGCCGGGGAAGGCGATCCTGTCGCTTCTGCCGGAGGGACGCTGGCCGGCCGGCGCGTCGGACGAGCTGCGCGCGGCGGCGACGTCCGTGGCGACGGACGGGTATGCGACGAGTCACGACGAGGTCATCCCGAGCCTGCACGCGGTCGCCGTCCCGGTCGCCCTGCGCGGGCGCGAGCCGGCGGCGATCGCGGTCGTGTATCTCGCGACCGCGCACGACCCCGCCCGCATCGCCGAACGCCTGAACCGGTCCGCCGCGCTCATCCGAGAGGCGCTCGGCGGCTGA
PROTEIN sequence
Length: 235
MSDAATAPSQTLSRGIRILEILADARESLSIDEVARRLAVHRSVAYRLLRTLEDHGLTARDAAGRVVLGSRLAALAAGVAHDLQAEALPELTAVANELGMTCFLSVRDHDDAITLASVEPRHAVASVAQRPGTRHPVTVGAPGKAILSLLPEGRWPAGASDELRAAATSVATDGYATSHDEVIPSLHAVAVPVALRGREPAAIAVVYLATAHDPARIAERLNRSAALIREALGG*