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cn_combo_scaffold_4042_6

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(5457..6806)

Top 3 Functional Annotations

Value Algorithm Source
Integrase core domain protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1F7_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 94.2
  • Coverage: 449.0
  • Bit_score: 859
  • Evalue 1.90e-246
Transposase insI for insertion sequence element IS30B/C/D {ECO:0000313|EMBL:AJQ91308.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 449.0
  • Bit_score: 859
  • Evalue 2.70e-246
transposase similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 449.0
  • Bit_score: 794
  • Evalue 1.30e-227
  • rbh

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGCGTTCTCCTGGGCGGCCTGACCCGTCGCGGGCGGTGCAGCGGCAGTTCTGGCGTCTGATCGCGGCGGGTATCACGTCGGCCGAGGCTGCGCTTGAGGTCGGCGTGTCTGTGCCGGTCGGGACCCGTTGGTTTCGTCACGCTGGCGGCATGCCACCGATCTCACTGGCCGAACCCGCCGGCCGCTACCTGTCCTTCGAGGAGCGTGAGGAGATCGCGTTGCTGCGTGCCAGGCAGGTTGGGGTGCGTGAGATCGCTCGCAGGATCGGTCGTGACCCCGGGACCATTTCTCGCGAGCTGCGTCGCAACGCGGCCACCCGCAGTGGGACGCTGGAGTATCGGGCGTTGGTGGCGCAGTGGAAAGCGCAACAGGCGGCGAAGCGCCCGAAGACGGCGAGGCTCGCGACCAACGACAGGTTGCGCGAGTACGTCCAAGAGCGTCTTGCCGGCAACGTCCGCAGGCCCGACGGCAGCATCGTCGTCGGGCCGGAACCACCGGCATGGAAGGGGCTGAACAAGCCGCATCGGCAGGACCGACGGTGGGTGACCGCGTGGAGTCCGGAGCAGATCTCGCACCGGCTGAAGGTCGACTTCCCGGATGATGAGTCCATGCGCATCAGCCACGAGGCGATCTACCAGTCGCTGTTCATCCAGGGCCGTGGTGCGCTCAAACGCGAGCTCGTCACCTGCCTGCGAACCGGCCGCGCGCTGCGCCGGCCACGGGCTCGAGCGCAGAACGGGCCGCAGGGGCATGTCACCGCGGATGTGGTGTTCTCCGAGCGCCCTGCGGAGGCTGCGGACCGCGCCGTCCCCGGGCATTGGGAAGGCGACTTGATCATCGGCACGGGCAGGTCCGCGATTGGCACGATCGTTGAGCGCAAGAGCCGCTCGACACTCCTGGTGCATCTGCCGCGGCTGGAAGGCTATGGCGAGATACCGCCGGTGAAGAACGGTCCCGCGCTCGGCGGCTATGGCGCGATCGCGATGAACGCCGCGCTGACCGCGTCGATGACGAAGCTTCCCGAACAGCTCCGCAAGACACTCACCTGGGATCGCGGCAAGGAACTCTCCGCGCACGCTCAGTTCGCGATTGAGACGGGCACGAAGGTGTTCTTCGCGGACCCTCACTCGCCGTGGCAGCGGCCGACGAACGAGAACACCAACGGGCTGCTGCGGCAATACTTCCCGAAGGGCACGGACCTCTCACGGTGGTCCGCCGAGGACCTGGAAGCGGTCGCTCTCGCGCTCAACAACAGGCCCCGCAAGAGCCTCGACTGGCGCACACCCGCCGAAGTCTTCGAAGAGCAGCTACGCTCACTCGAACAACCCGGTGTTGCAACGACCGGTTGA
PROTEIN sequence
Length: 450
MRSPGRPDPSRAVQRQFWRLIAAGITSAEAALEVGVSVPVGTRWFRHAGGMPPISLAEPAGRYLSFEEREEIALLRARQVGVREIARRIGRDPGTISRELRRNAATRSGTLEYRALVAQWKAQQAAKRPKTARLATNDRLREYVQERLAGNVRRPDGSIVVGPEPPAWKGLNKPHRQDRRWVTAWSPEQISHRLKVDFPDDESMRISHEAIYQSLFIQGRGALKRELVTCLRTGRALRRPRARAQNGPQGHVTADVVFSERPAEAADRAVPGHWEGDLIIGTGRSAIGTIVERKSRSTLLVHLPRLEGYGEIPPVKNGPALGGYGAIAMNAALTASMTKLPEQLRKTLTWDRGKELSAHAQFAIETGTKVFFADPHSPWQRPTNENTNGLLRQYFPKGTDLSRWSAEDLEAVALALNNRPRKSLDWRTPAEVFEEQLRSLEQPGVATTG*