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cn_combo_scaffold_7006_5

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: 6106..7092

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor n=1 Tax=Microbacterium sp. TS-1 RepID=U2XRJ6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 328.0
  • Bit_score: 590
  • Evalue 1.20e-165
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 328.0
  • Bit_score: 588
  • Evalue 5.00e-165
nusA; transcription elongation factor similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 328.0
  • Bit_score: 577
  • Evalue 3.00e-162

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 987
GTGGACATCGATCTCGGACTGCTGCGAACGGTCGAGCGTGAGAAGGAGATCCCCTTCGACGAGCTCGTCAGGATCATCGAGCAGGCGATCCTCACCGCCTACGCCAAGCACACCTCGCCCGATGGAGAGCTGCCCGCGGGCGCCCGGGCGGAGCTGAACCGCAAGACCGGCCACGTCGCGGTCTTCATCCCCCTCCTCGACGAGAACGACGCGGTGATCGGCGAAGAGGAGTCGACGCCGGAGAACTTCGGTCGGATCGCCGCCTTCGCCGCGAAGCAGGTCATCAGCCAGCGTCTGCGCGACATCGCCGACGACGCGGTCCTGGGGGAGTTCCGCGGCAAGGAGGGCGACATCGTCGCGGGTGTCGTCCAGCAGGGCCCCAACCCCCGCATGATCCACGTCGATCTCGGCACGGTCGAGGCGATCCTCCCGCCCGAGGAGCAGGTGCCGGGCGAGGACTACTCCCACGGGTCTCGTCTGCGCGTCTACGTCACGTCGGTGTCGAAGGGGACCAAAGGCCCGCAGATCACCGTTTCTCGCACGCACCCCGGCCTCGTCCGCAAGCTCTTCGCCCTCGAGGTCCCCGAGATCCCCGCGGGCCTCGTCGAGATCGTCTCCCTCGCGCGGGAGGCCGGTCACCGCACGAAGATCGCCGTGAAGGCGAACGACTCCACGATCAACGCCAAGGGCGCGTGCATCGGCGAGCTCGGGCGTCGCGTGCGCGCGGTGACGGAGGAGCTCGGCGGGGAGAAGATCGACATCGTCGACTACGCCGCGGACCTCCCGACGTTCGTCGCGAACGCGCTGTCGCCGGCGAAGGTGACCTCCAGCTTCGTGCTGGACGCCTCGACCAAGGCGGTGCGGGCGCTCGTGCCCGACTACCAGCTGTCCCTCGCCATCGGCAAGGAGGGTCAGAACGCGCGCCTGGCCGCCAAGCTCACCGGCGCCAAGATCGACATCCAGCCCGACTCGATCCTGGAGTCCTGA
PROTEIN sequence
Length: 329
VDIDLGLLRTVEREKEIPFDELVRIIEQAILTAYAKHTSPDGELPAGARAELNRKTGHVAVFIPLLDENDAVIGEEESTPENFGRIAAFAAKQVISQRLRDIADDAVLGEFRGKEGDIVAGVVQQGPNPRMIHVDLGTVEAILPPEEQVPGEDYSHGSRLRVYVTSVSKGTKGPQITVSRTHPGLVRKLFALEVPEIPAGLVEIVSLAREAGHRTKIAVKANDSTINAKGACIGELGRRVRAVTEELGGEKIDIVDYAADLPTFVANALSPAKVTSSFVLDASTKAVRALVPDYQLSLAIGKEGQNARLAAKLTGAKIDIQPDSILES*