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cn_combo_scaffold_16746_3

Organism: CN-SCN_Microbacterium_18x

partial RP 35 / 55 MC: 2 BSCG 33 / 51 ASCG 10 / 38
Location: comp(2760..3953)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase n=1 Tax=Microbacterium sp. TS-1 RepID=U2XRB3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 358.0
  • Bit_score: 556
  • Evalue 2.40e-155
Ribonuclease BN {ECO:0000313|EMBL:KJC64756.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 356.0
  • Bit_score: 564
  • Evalue 9.40e-158
choline dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 385.0
  • Bit_score: 517
  • Evalue 2.70e-144

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Taxonomy

Agreia bicolorata → Agreia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
GTGAGCTCACCCGCTACATCGAAGAGGTCGAGCGCACCGTCGGCGTCTCCGGCCCGACGCCGTATCCGTGGGACGAGGGGCGCGAGTACCACTGGCCGGCGGTCGCGCGGAACGCCCCCGCGGAACGCCCCCGCGGACGTCGTCGCGGACGGCTGCGCGCGCGAGGGCATCCGCACAGCCACCGCGCCGGCGGCGATCCTCACGCGCGACCACGACCAGCCGCACTACGGGCGCCGGTCACGAAACCTGAATTTCGGCAGCATCCACCAGGGAGACCGGAGCGACGCAAAGGCCACCACTGCGAACACCTACCTCCCCGCCGCGGTCGCCGCCGGTGCCGAGATCCGCCCGGACAGCACCGTGCACGGGATCGAGCTCGACGCCCGCGGACACGTGTCGGCCGTCGTCTACACGCGCGCCGGTCTGGAGGTGCGGCAGCGGTGCGCGACCCTCGTGCTCGCGGCGGGGGGCGTGGAGACTCCGCGCCTCCTCTTGCACACCGGCCTCGCGAACTCGAGCGGCGCTGTGGGGCGGAACTTCCTCGCCCACGGCGCACTGCAGGTGTGGGGACGCTTCGACGCGCAGATCCGCGGCTACCGCGGCTACCCGTCGTCGGTCATCAGCGAGGACTTCGTCCGTCCTACCGGTGTCGACTTCGCCGGCGGCTATCTGATCCAGAGCCTCGGGGTCATGCCCGTCACCTACGCCACCACCCTCGTGCGCGGCGGCGGCCTGTGGGGTCAGGAGCTCATGGATGCCCTCGACGCGTGGCAGTACTCCGTCGGCGTCGGGATCAACGGCGAATGCCTTCCTTCCGAGAGGAACCGTCTCGTCCTCACCGACGAGGTGGACGAGTTCGGTGTCCCGCGGGCAGAAATCACGTTCACCCCGGGGGCGAACGAAGAGGCGATCGACCGGCACGCGGCGCGCACACTCACCGGCATCCTCGAGGGCGCCGGTGCGCGCGAGACACGTGTGCTCGCCCGCACGGCCCACACCCTCGGCACGTGCCGCATGAGTGCCGATCCCGCGGAGGGCGTCGTCGATCCGGACGGGCGGAGCCACGACATCCCGAACCTGTGGGTGTGCGACAACTCGACGTTCCCGAGCGCACTGTCGGCGAACCCGTGCCTCGCACAGATGGCGCTGTCACTGCGGACGGCGGACCGGATGCTGGCCTCTCGGGCGGCCTGA
PROTEIN sequence
Length: 398
VSSPATSKRSSAPSASPARRRIRGTRGASTTGRRSRGTPPRNAPADVVADGCAREGIRTATAPAAILTRDHDQPHYGRRSRNLNFGSIHQGDRSDAKATTANTYLPAAVAAGAEIRPDSTVHGIELDARGHVSAVVYTRAGLEVRQRCATLVLAAGGVETPRLLLHTGLANSSGAVGRNFLAHGALQVWGRFDAQIRGYRGYPSSVISEDFVRPTGVDFAGGYLIQSLGVMPVTYATTLVRGGGLWGQELMDALDAWQYSVGVGINGECLPSERNRLVLTDEVDEFGVPRAEITFTPGANEEAIDRHAARTLTGILEGAGARETRVLARTAHTLGTCRMSADPAEGVVDPDGRSHDIPNLWVCDNSTFPSALSANPCLAQMALSLRTADRMLASRAA*